Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   DV143_RS06385 Genome accession   NZ_CP031333
Coordinates   1084152..1084796 (-) Length   214 a.a.
NCBI ID   WP_002226073.1    Uniprot ID   A0A378VTS6
Organism   Neisseria meningitidis strain M18727     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1079152..1089796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV143_RS06345 ftsL 1079523..1079786 (-) 264 WP_002220363.1 cell division protein FtsL -
  DV143_RS06350 rsmH 1079783..1080769 (-) 987 WP_014581354.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  DV143_RS06355 mraZ 1080766..1081221 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  DV143_RS06360 - 1081500..1082717 (+) 1218 WP_014581353.1 class I SAM-dependent methyltransferase -
  DV143_RS06380 - 1083298..1084119 (-) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  DV143_RS06385 dsbA1 1084152..1084796 (-) 645 WP_002226073.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV143_RS06390 ftsN 1084799..1085644 (-) 846 WP_002226072.1 cell division protein FtsN -
  DV143_RS06395 comM 1085750..1087246 (-) 1497 WP_014581352.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV143_RS06400 - 1087260..1087580 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  DV143_RS06410 putP 1088063..1089589 (+) 1527 WP_002227025.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23967.99 Da        Isoelectric Point: 9.8294

>NTDB_id=305924 DV143_RS06385 WP_002226073.1 1084152..1084796(-) (dsbA1) [Neisseria meningitidis strain M18727]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=305924 DV143_RS06385 WP_002226073.1 1084152..1084796(-) (dsbA1) [Neisseria meningitidis strain M18727]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378VTS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment