Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DV163_RS07260 Genome accession   NZ_CP031330
Coordinates   1220852..1221547 (-) Length   231 a.a.
NCBI ID   WP_002215704.1    Uniprot ID   Q7DDR6
Organism   Neisseria meningitidis strain M21955     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1215852..1226547
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV163_RS07250 - 1218125..1218931 (-) 807 WP_002221947.1 inner membrane protein YpjD -
  DV163_RS07255 ffh 1219151..1220521 (+) 1371 WP_002215706.1 signal recognition particle protein -
  DV163_RS07260 dsbA2 1220852..1221547 (-) 696 WP_002215704.1 DsbA family protein Machinery gene
  DV163_RS07265 - 1221662..1223772 (-) 2111 Protein_1194 TonB-dependent receptor -
  DV163_RS07270 - 1223958..1224563 (-) 606 WP_002221946.1 nitroreductase family protein -
  DV163_RS07275 - 1224612..1225010 (-) 399 WP_002216361.1 DoxX family protein -
  DV163_RS07280 - 1225118..1226029 (+) 912 WP_002221945.1 LysR family transcriptional regulator -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25419.90 Da        Isoelectric Point: 5.1502

>NTDB_id=305838 DV163_RS07260 WP_002215704.1 1220852..1221547(-) (dsbA2) [Neisseria meningitidis strain M21955]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=305838 DV163_RS07260 WP_002215704.1 1220852..1221547(-) (dsbA2) [Neisseria meningitidis strain M21955]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterProScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

100

100

1

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment