Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   DV167_RS07890 Genome accession   NZ_CP031329
Coordinates   1353630..1354274 (-) Length   214 a.a.
NCBI ID   WP_002251067.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22425     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1348630..1359274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV167_RS07855 ftsL 1349008..1349271 (-) 264 WP_002232818.1 cell division protein FtsL -
  DV167_RS07860 rsmH 1349268..1350254 (-) 987 WP_002251068.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  DV167_RS07865 mraZ 1350251..1350706 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  DV167_RS07870 - 1351012..1352202 (+) 1191 WP_162818941.1 class I SAM-dependent methyltransferase -
  DV167_RS07885 - 1352775..1353596 (-) 822 WP_002242315.1 undecaprenyl-diphosphate phosphatase -
  DV167_RS07890 dsbA1 1353630..1354274 (-) 645 WP_002251067.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV167_RS07895 ftsN 1354277..1355122 (-) 846 WP_002251066.1 cell division protein FtsN -
  DV167_RS07900 comM 1355228..1356724 (-) 1497 WP_002251065.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV167_RS07905 - 1356738..1357058 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  DV167_RS07915 putP 1357541..1359067 (+) 1527 WP_002251064.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23819.82 Da        Isoelectric Point: 9.7106

>NTDB_id=305789 DV167_RS07890 WP_002251067.1 1353630..1354274(-) (dsbA1) [Neisseria meningitidis strain M22425]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVVVGGKYRVIFNNGFDGGIHTIKELLAKVRAERKLSNHPVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=305789 DV167_RS07890 WP_002251067.1 1353630..1354274(-) (dsbA1) [Neisseria meningitidis strain M22425]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCCGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATATGGTATTGACAGCACGCCGACCGTTGTTGTCGGCGGGAAATACCGCGTCATCTTCAATAATGGCTT
TGATGGCGGAATCCATACCATTAAAGAATTGCTTGCCAAAGTCAGGGCGGAGCGCAAACTGTCAAACCATCCTGTGCAAA
AATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.15

87.383

0.491
  dsbA2 Neisseria meningitidis MC58

50.27

86.449

0.435

Multiple sequence alignment