Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   DV144_RS04995 Genome accession   NZ_CP031328
Coordinates   811282..811926 (+) Length   214 a.a.
NCBI ID   WP_002238767.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 806282..816926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS04970 putP 806470..807996 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  DV144_RS04980 - 808480..808800 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  DV144_RS04985 comM 808814..810310 (+) 1497 WP_002238765.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV144_RS04990 ftsN 810416..811279 (+) 864 WP_002238766.1 cell division protein FtsN -
  DV144_RS04995 dsbA1 811282..811926 (+) 645 WP_002238767.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV144_RS05000 - 811960..812781 (+) 822 WP_002218777.1 undecaprenyl-diphosphate phosphatase -
  DV144_RS05020 - 813363..814553 (-) 1191 WP_050584817.1 class I SAM-dependent methyltransferase -
  DV144_RS05025 mraZ 814859..815314 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  DV144_RS05030 rsmH 815311..816297 (+) 987 WP_002220362.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  DV144_RS05035 ftsL 816294..816557 (+) 264 WP_002220363.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23807.77 Da        Isoelectric Point: 9.7106

>NTDB_id=305731 DV144_RS04995 WP_002238767.1 811282..811926(+) (dsbA1) [Neisseria meningitidis strain M18755]
MKLKHLLPLLLSAALSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVVVGGKYRVIFNNGFDGGIHTIKELLAKVRAERKLSNHPVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=305731 DV144_RS04995 WP_002238767.1 811282..811926(+) (dsbA1) [Neisseria meningitidis strain M18755]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGCGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCCGCCGTCAATTTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATATGGTATTGACAGCACGCCGACCGTTGTTGTCGGCGGGAAATACCGCGTCATCTTCAATAATGGCTT
TGATGGCGGAATCCATACCATTAAAGAATTGCTTGCCAAAGTCAGGGCGGAGCGCAAACTGTCAAACCATCCTGTGCAAA
AATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.15

87.383

0.491
  dsbA2 Neisseria meningitidis MC58

50.27

86.449

0.435

Multiple sequence alignment