Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DV144_RS03920 Genome accession   NZ_CP031328
Coordinates   651303..651998 (+) Length   231 a.a.
NCBI ID   WP_002238667.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 646303..656998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS03895 - 646925..647323 (+) 399 WP_002216361.1 DoxX family protein -
  DV144_RS03900 - 647372..647977 (+) 606 WP_002215700.1 nitroreductase family protein -
  DV144_RS03910 - 648163..650275 (+) 2113 Protein_642 TonB-dependent receptor -
  DV144_RS03915 - 650473..651132 (+) 660 WP_002218694.1 NYN domain-containing protein -
  DV144_RS03920 dsbA2 651303..651998 (+) 696 WP_002238667.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV144_RS03925 ffh 652329..653699 (-) 1371 WP_061369981.1 signal recognition particle protein -
  DV144_RS03930 - 653919..654725 (+) 807 WP_002215708.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25446.97 Da        Isoelectric Point: 5.3625

>NTDB_id=305726 DV144_RS03920 WP_002238667.1 651303..651998(+) (dsbA2) [Neisseria meningitidis strain M18755]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSNTSAPATPAALTEGINYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=305726 DV144_RS03920 WP_002238667.1 651303..651998(+) (dsbA2) [Neisseria meningitidis strain M18755]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAACACATCCGCTCCGGCAACCCCTGCCGCATTGACCGAAGGTATCAATTACACCGTAT
TGTCCAATCCGATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.97

100

0.97

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment