Detailed information NTG0305642

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DV115_RS05590
• Genome accession: NZ_CP031325
• Coordinates: 1014668..1016077 (-)
• Length: 469 a.a.
• NCBI ID: WP_003753660.1
• Uniprot ID: -
• Organism: Neisseria polysaccharea strain M18661
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1009668..1021077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV115_RS05575	-	1009998..1011224 (+)	1227	WP_003753670.1	PilT/PilU family type 4a pilus ATPase	-
DV115_RS05580	yccS	1011341..1013491 (+)	2151	WP_003753669.1	YccS family putative transporter	-
DV115_RS05585	-	1014118..1014375 (-)	258	Protein_936	DUF3079 domain-containing protein	-
DV115_RS05590	pilA	1014668..1016077 (-)	1410	WP_003753660.1	signal recognition particle-docking protein FtsY	Machinery gene
DV115_RS05600	msrAB	1016223..1017791 (+)	1569	WP_003753658.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
DV115_RS05605	-	1017875..1018360 (-)	486	WP_003753656.1	CinA family protein	-
DV115_RS05610	-	1018385..1019233 (-)	849	WP_003753654.1	mechanosensitive ion channel family protein	-
DV115_RS05615	-	1019328..1020329 (-)	1002	WP_003753652.1	thiamine ABC transporter substrate-binding protein	-
DV115_RS05625	-	1020528..1020800 (+)	273	WP_115437563.1	spore cortex protein	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 50002.72 Da
• Isoelectric Point: 4.3681

>NTDB_id=305642 DV115_RS05590 WP_003753660.1 1014668..1016077(-) (pilA) [Neisseria polysaccharea strain M18661]
MFSFFRRKKKQETPAPEEAQIQETAAKAESEVAQIVENIKEDAESLTESVKGQVESAVETVSSAVEQVKETVAEMPSEAA
EVAEKAAEQVEAVKEAVAETVSGAVEQVKEAVAEMPSEAEEAAEKAAEYVESAKEAVAETVGEVVEQVQEAVAAMPSEAA
APTEESKPSWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITGDMGMEATEYLMKDVRDRVSLKGLKDGN
ELRGALKDALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWG
ERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPDAPHEIIVVLDANIGQ
NAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDALLD

Nucleotide

• Length: 1410 bp

>NTDB_id=305642 DV115_RS05590 WP_003753660.1 1014668..1016077(-) (pilA) [Neisseria polysaccharea strain M18661]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACTCCGGCTCCCGAGGAGGCTCAAATTCAGGAAACCGCAGCAAA
AGCAGAATCTGAAGTTGCTCAAATAGTTGAAAATATTAAAGAAGACGCTGAATCTTTAACGGAAAGCGTTAAAGGCCAGG
TCGAATCTGCCGTTGAAACCGTCAGTAGTGCGGTTGAACAGGTAAAGGAAACTGTTGCCGAGATGCCATCTGAAGCGGCT
GAGGTTGCAGAAAAAGCAGCGGAACAAGTCGAAGCGGTAAAAGAAGCCGTTGCCGAAACCGTCAGCGGTGCGGTTGAACA
GGTAAAGGAAGCCGTTGCCGAAATGCCGTCTGAAGCAGAGGAAGCGGCTGAAAAAGCAGCGGAATATGTTGAATCCGCAA
AAGAAGCCGTTGCCGAAACCGTCGGCGAGGTTGTTGAACAGGTTCAAGAGGCTGTTGCCGCAATGCCGTCTGAAGCCGCC
GCGCCAACCGAAGAATCCAAACCGAGTTGGGCGGCGCGTTTGAAACAGGGTTTGACCAAATCGCGCGACAAAATGGCGAA
ATCGCTGGCGGGCGTGTTCGGCGGCGGACAAATCGACGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACCGGTG
ATATGGGCATGGAAGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGGCAAC
GAATTGCGCGGCGCGCTGAAAGATGCGCTGTACGACCTGATTAAGCCTCTGGAGAAACCTTTGGTCTTGCCCGAAACCAA
AGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTTGCCAAATATTTCC
AAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGTGCCGCCGCGCGTGAGCAGCTTCAAGCTTGGGGC
GAGCGCAACAACGTAACCGTGATTTCGCAAACCACGGGCGATTCCGCAGCCGTTTGTTTTGATGCCGTCCAAGCCGCCAA
AGCGCGCGGCATCGACATTGTGCTTGCTGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATCAAAA
AAGTGAAGCGCGTGCTGCAAAAAGCCATCCCCGACGCGCCGCACGAAATCATCGTCGTGCTTGATGCCAACATCGGGCAA
AACGCCGTCAACCAAGTCAAAGCCTTTGACGATGCGCTGGGGCTGACGGGGCTTATCGTTACCAAACTAGACGGCACGGC
AAAAGGCGGTATCCTTGCCGCGCTTGCCTCCGACCGCCCAGTTCCCGTTCGCTACATCGGTGTGGGCGAAGGCATAGACG
ATTTGCGTCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (269-468)

• SRP54-type protein, helical bundle domain (SRP54_N) (184-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	81.45	100	0.815