Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   DV175_RS01120 Genome accession   NZ_CP031324
Coordinates   212108..212752 (-) Length   214 a.a.
NCBI ID   WP_002237685.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M23347     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 207108..217752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV175_RS01080 ftsL 207479..207742 (-) 264 WP_002220363.1 cell division protein FtsL -
  DV175_RS01085 rsmH 207739..208725 (-) 987 WP_061837686.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  DV175_RS01090 mraZ 208722..209177 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  DV175_RS01095 - 209483..210673 (+) 1191 WP_162818907.1 class I SAM-dependent methyltransferase -
  DV175_RS01115 - 211254..212075 (-) 822 WP_061837685.1 undecaprenyl-diphosphate phosphatase -
  DV175_RS01120 dsbA1 212108..212752 (-) 645 WP_002237685.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV175_RS01125 ftsN 212755..213600 (-) 846 WP_002237684.1 cell division protein FtsN -
  DV175_RS01130 comM 213706..215202 (-) 1497 WP_002237683.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  DV175_RS01135 - 215216..215536 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  DV175_RS01145 putP 216019..217545 (+) 1527 WP_002220352.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24041.04 Da        Isoelectric Point: 9.8294

>NTDB_id=305584 DV175_RS01120 WP_002237685.1 212108..212752(-) (dsbA1) [Neisseria meningitidis strain M23347]
MKFKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDNTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQPPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=305584 DV175_RS01120 WP_002237685.1 212108..212752(-) (dsbA1) [Neisseria meningitidis strain M23347]
ATGAAGTTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCCGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGGAAAGTGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCTCCCGAAGCTGCCGCCGCTGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAACACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGCCCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment