Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | DWB95_RS03810 | Genome accession | NZ_CP031280 |
| Coordinates | 800946..801329 (+) | Length | 127 a.a. |
| NCBI ID | WP_017636762.1 | Uniprot ID | A0A654BGK9 |
| Organism | Staphylococcus pasteuri strain 3C | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 795946..806329
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB95_RS03780 (DWB95_03795) | atpD | 796191..797603 (+) | 1413 | WP_017636767.1 | F0F1 ATP synthase subunit beta | - |
| DWB95_RS03785 (DWB95_03800) | - | 797623..798024 (+) | 402 | WP_017636766.1 | F0F1 ATP synthase subunit epsilon | - |
| DWB95_RS03790 (DWB95_03805) | - | 798175..798408 (+) | 234 | WP_017636765.1 | DUF1146 family protein | - |
| DWB95_RS03795 (DWB95_03810) | murA | 798520..799785 (+) | 1266 | WP_017636764.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| DWB95_RS03800 (DWB95_03815) | fabZ | 799821..800261 (+) | 441 | WP_002451649.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| DWB95_RS03805 (DWB95_03820) | - | 800320..800760 (-) | 441 | WP_017636763.1 | YwpF-like family protein | - |
| DWB95_RS03810 (DWB95_03825) | ssb | 800946..801329 (+) | 384 | WP_017636762.1 | single-stranded DNA-binding protein | Machinery gene |
| DWB95_RS03815 (DWB95_03830) | - | 801736..802464 (+) | 729 | WP_029056185.1 | transglycosylase family protein | - |
| DWB95_RS03820 (DWB95_03835) | tenA | 802824..803513 (+) | 690 | WP_017636760.1 | thiaminase II | - |
| DWB95_RS03825 (DWB95_03840) | thiD | 803506..804327 (+) | 822 | WP_017636759.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DWB95_RS03830 (DWB95_03845) | thiM | 804320..805111 (+) | 792 | WP_046466905.1 | hydroxyethylthiazole kinase | - |
| DWB95_RS03835 (DWB95_03850) | thiE | 805112..805753 (+) | 642 | WP_046466906.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14600.39 Da Isoelectric Point: 5.7839
>NTDB_id=305412 DWB95_RS03810 WP_017636762.1 800946..801329(+) (ssb) [Staphylococcus pasteuri strain 3C]
MLNKIVIVGRLTKDAQIYEKEDGNKVATFCVATERNYKDQNNEIACDYLYCKAFGKTASNIEKYTHQGSLVGITGQMRSR
KYEKDNQTHFVTELYVETIKFMSSKAKESNILSNEYDEESNELFNIG
MLNKIVIVGRLTKDAQIYEKEDGNKVATFCVATERNYKDQNNEIACDYLYCKAFGKTASNIEKYTHQGSLVGITGQMRSR
KYEKDNQTHFVTELYVETIKFMSSKAKESNILSNEYDEESNELFNIG
Nucleotide
Download Length: 384 bp
>NTDB_id=305412 DWB95_RS03810 WP_017636762.1 800946..801329(+) (ssb) [Staphylococcus pasteuri strain 3C]
ATGTTAAACAAAATAGTTATAGTTGGCAGACTTACTAAAGATGCCCAAATTTATGAAAAGGAGGACGGTAATAAAGTAGC
AACTTTTTGTGTAGCTACTGAAAGAAATTATAAAGATCAAAATAATGAGATTGCATGCGATTATCTATATTGTAAAGCTT
TTGGCAAAACTGCAAGTAACATTGAAAAATATACACATCAAGGTTCACTAGTAGGAATAACTGGTCAAATGCGATCGCGA
AAATATGAAAAAGATAACCAGACTCATTTTGTAACAGAACTATATGTAGAAACAATTAAATTTATGTCCTCTAAGGCAAA
AGAATCCAATATCCTCTCTAACGAATATGATGAAGAGTCAAATGAACTCTTTAATATAGGTTAG
ATGTTAAACAAAATAGTTATAGTTGGCAGACTTACTAAAGATGCCCAAATTTATGAAAAGGAGGACGGTAATAAAGTAGC
AACTTTTTGTGTAGCTACTGAAAGAAATTATAAAGATCAAAATAATGAGATTGCATGCGATTATCTATATTGTAAAGCTT
TTGGCAAAACTGCAAGTAACATTGAAAAATATACACATCAAGGTTCACTAGTAGGAATAACTGGTCAAATGCGATCGCGA
AAATATGAAAAAGATAACCAGACTCATTTTGTAACAGAACTATATGTAGAAACAATTAAATTTATGTCCTCTAAGGCAAA
AGAATCCAATATCCTCTCTAACGAATATGATGAAGAGTCAAATGAACTCTTTAATATAGGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
81.579 |
89.764 |
0.732 |
| ssb | Staphylococcus aureus MW2 |
80.702 |
89.764 |
0.724 |