Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   DWB95_RS01175 Genome accession   NZ_CP031280
Coordinates   268116..269009 (+) Length   297 a.a.
NCBI ID   WP_046466949.1    Uniprot ID   -
Organism   Staphylococcus pasteuri strain 3C     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 263116..274009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DWB95_RS01155 (DWB95_01160) - 264660..265109 (+) 450 WP_070453304.1 helix-turn-helix domain-containing protein -
  DWB95_RS01160 (DWB95_01165) - 265343..265444 (+) 102 WP_017637237.1 SE2200 family small protein -
  DWB95_RS01165 (DWB95_01170) - 265535..266989 (-) 1455 WP_029055919.1 alkaline phosphatase -
  DWB95_RS12520 - 267256..267423 (+) 168 WP_017637236.1 hypothetical protein -
  DWB95_RS01170 (DWB95_01175) braR 267445..268110 (+) 666 WP_046466948.1 response regulator transcription factor Regulator
  DWB95_RS01175 (DWB95_01180) braS 268116..269009 (+) 894 WP_046466949.1 sensor histidine kinase Regulator
  DWB95_RS01180 (DWB95_01185) - 269116..269868 (+) 753 WP_107999988.1 ABC transporter ATP-binding protein -
  DWB95_RS01185 (DWB95_01190) - 269874..271880 (+) 2007 WP_124760341.1 FtsX-like permease family protein -
  DWB95_RS01190 (DWB95_01195) - 272003..272797 (+) 795 WP_029055924.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 297 a.a.        Molecular weight: 34343.88 Da        Isoelectric Point: 6.3050

>NTDB_id=305408 DWB95_RS01175 WP_046466949.1 268116..269009(+) (braS) [Staphylococcus pasteuri strain 3C]
MMLPFIKTIKNEIAIVTLILLLFAVIFFVFSLSMSALLLGIAIVLFIMLIYWWISYLGFQKQVNLKHKIEVLEEELFETK
KRQAEYQKDIESYFLTWVHQIKTPITATQLLLERNEHNVVNQVRQEIVQIDNYTSLALSYLKLLNEASDMSISEVKIDEL
IKPLIMKYRVHFIEQNTKIHYQSVDDNVLTDAQWASILIEQLLNNALKYARGKDIWINFNSETKQLHIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHISQHLNLNVEVESKLNSGTQFTIDFPRE

Nucleotide


Download         Length: 894 bp        

>NTDB_id=305408 DWB95_RS01175 WP_046466949.1 268116..269009(+) (braS) [Staphylococcus pasteuri strain 3C]
ATGATGTTACCTTTTATAAAAACAATTAAAAATGAAATTGCAATCGTCACATTAATATTATTATTATTTGCTGTGATCTT
TTTTGTATTTTCACTTTCAATGAGTGCATTGCTGCTTGGTATTGCTATTGTTTTATTTATTATGCTGATTTATTGGTGGA
TTAGTTATTTAGGATTTCAAAAACAAGTTAATCTTAAACATAAAATAGAGGTACTTGAAGAAGAATTATTTGAAACAAAA
AAACGACAAGCTGAATATCAAAAAGATATTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATTACTGC
CACCCAATTATTATTAGAACGTAATGAACATAATGTTGTTAATCAAGTAAGACAAGAAATAGTACAAATAGATAATTATA
CTAGTCTAGCATTAAGTTATTTGAAATTACTTAATGAAGCTTCTGATATGAGTATTTCAGAAGTAAAAATTGACGAGTTA
ATCAAGCCTTTAATTATGAAGTATCGTGTACATTTTATTGAACAAAATACTAAAATCCATTATCAATCAGTTGATGATAA
CGTATTAACCGATGCACAATGGGCATCTATATTAATAGAACAGTTGTTAAATAATGCATTAAAGTATGCACGTGGCAAAG
ATATTTGGATTAACTTTAACTCAGAAACAAAACAATTACATATCAAAGATAATGGTATAGGTATTAGCCAAGCAGATTTA
CCGAAAATCTTTGACAAAGGATATTCTGGATATAATGGGAGTCTTAATGAATCATCTAGTGGTATAGGTTTATTTATTGT
TAAACACATATCTCAACATCTTAATTTAAACGTTGAAGTAGAATCAAAATTAAACAGTGGTACGCAATTTACGATTGATT
TTCCAAGAGAATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.017

99.327

0.606

Multiple sequence alignment