Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DWB95_RS01170 Genome accession   NZ_CP031280
Coordinates   267445..268110 (+) Length   221 a.a.
NCBI ID   WP_046466948.1    Uniprot ID   A0AAW7YMP8
Organism   Staphylococcus pasteuri strain 3C     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 262445..273110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DWB95_RS01145 (DWB95_01150) - 262554..262766 (+) 213 WP_070453311.1 hypothetical protein -
  DWB95_RS01150 (DWB95_01155) - 262853..264493 (-) 1641 WP_124760339.1 alpha-keto acid decarboxylase family protein -
  DWB95_RS01155 (DWB95_01160) - 264660..265109 (+) 450 WP_070453304.1 helix-turn-helix domain-containing protein -
  DWB95_RS01160 (DWB95_01165) - 265343..265444 (+) 102 WP_017637237.1 SE2200 family small protein -
  DWB95_RS01165 (DWB95_01170) - 265535..266989 (-) 1455 WP_029055919.1 alkaline phosphatase -
  DWB95_RS12520 - 267256..267423 (+) 168 WP_017637236.1 hypothetical protein -
  DWB95_RS01170 (DWB95_01175) braR 267445..268110 (+) 666 WP_046466948.1 response regulator transcription factor Regulator
  DWB95_RS01175 (DWB95_01180) braS 268116..269009 (+) 894 WP_046466949.1 sensor histidine kinase Regulator
  DWB95_RS01180 (DWB95_01185) - 269116..269868 (+) 753 WP_107999988.1 ABC transporter ATP-binding protein -
  DWB95_RS01185 (DWB95_01190) - 269874..271880 (+) 2007 WP_124760341.1 FtsX-like permease family protein -
  DWB95_RS01190 (DWB95_01195) - 272003..272797 (+) 795 WP_029055924.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25587.63 Da        Isoelectric Point: 4.7451

>NTDB_id=305407 DWB95_RS01170 WP_046466948.1 267445..268110(+) (braR) [Staphylococcus pasteuri strain 3C]
MKIFIVEDDFVIAESLANELKNWNYEVSIAKQFSNILDDFITYQPDIVLLDINLPTLNGFHWCQEIRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNDELTVKGCKLIIDEAKIIYNEEAIQLSLTELQIIK
LLFQNEGKFVKRNALIEKCWESENYIDDNTLAVNMTRLRKKLNQIGLKDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=305407 DWB95_RS01170 WP_046466948.1 267445..268110(+) (braR) [Staphylococcus pasteuri strain 3C]
ATGAAGATTTTTATAGTAGAAGATGATTTTGTCATTGCAGAAAGTTTAGCTAATGAACTTAAAAATTGGAATTATGAGGT
AAGTATAGCTAAACAATTCTCAAATATTTTAGATGACTTCATCACATATCAACCTGACATAGTATTGTTAGATATTAATC
TACCGACATTAAATGGATTTCATTGGTGCCAAGAAATAAGAAAGATTTCTAATGTGCCTATTATATTTATCAGTTCTCGA
ACGGATAATATGGATCAAATTATGGCTATCCAAATGGGTGGCGATGACTTCATAGAAAAGCCATTTAATTTATCATTAAC
GGTTGCTAAAGTTCAAGCTTTACTTCGTCGTACCTATGATTTAGCAGTTTCCAATGATGAATTAACTGTCAAAGGTTGTA
AGTTAATTATTGATGAGGCCAAAATTATTTATAACGAAGAAGCAATACAATTATCTTTAACAGAACTTCAAATCATAAAG
TTATTATTCCAAAATGAAGGGAAATTCGTTAAACGCAATGCTTTGATTGAAAAATGTTGGGAATCTGAAAATTATATAGA
TGATAATACATTAGCCGTTAATATGACGCGACTGCGCAAGAAATTAAATCAAATTGGTTTAAAAGACTTTATTGAAACGA
AGAAAAATGTTGGATATAGGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

80.995

100

0.81

Multiple sequence alignment