Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DWB98_RS06605 | Genome accession | NZ_CP031275 |
| Coordinates | 1386124..1387098 (+) | Length | 324 a.a. |
| NCBI ID | WP_107543212.1 | Uniprot ID | A0A5R9B885 |
| Organism | Staphylococcus xylosus strain | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1381124..1392098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB98_RS06570 (DWB98_06580) | rpmG | 1381233..1381382 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| DWB98_RS06575 (DWB98_06585) | - | 1381514..1382056 (+) | 543 | WP_042362613.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| DWB98_RS06580 (DWB98_06590) | - | 1382068..1383525 (+) | 1458 | WP_069794317.1 | rhomboid family intramembrane serine protease | - |
| DWB98_RS06585 (DWB98_06595) | - | 1383509..1383709 (+) | 201 | WP_107542787.1 | YqgQ family protein | - |
| DWB98_RS06590 (DWB98_06600) | - | 1384091..1385077 (+) | 987 | WP_029377187.1 | glucokinase | - |
| DWB98_RS06595 (DWB98_06605) | - | 1385077..1385400 (+) | 324 | WP_042362616.1 | MTH1187 family thiamine-binding protein | - |
| DWB98_RS06600 (DWB98_06610) | - | 1385402..1386025 (+) | 624 | WP_042362617.1 | MBL fold metallo-hydrolase | - |
| DWB98_RS06605 (DWB98_06615) | comGA | 1386124..1387098 (+) | 975 | WP_107543212.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB98_RS06610 (DWB98_06620) | comGB | 1387070..1388137 (+) | 1068 | WP_107543211.1 | competence type IV pilus assembly protein ComGB | - |
| DWB98_RS06615 (DWB98_06625) | comGC | 1388157..1388474 (+) | 318 | WP_029377192.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB98_RS06620 (DWB98_06630) | - | 1388497..1388898 (+) | 402 | WP_261376951.1 | competence protein | - |
| DWB98_RS06625 (DWB98_06635) | - | 1388885..1389184 (+) | 300 | WP_107543122.1 | hypothetical protein | - |
| DWB98_RS06630 (DWB98_06640) | comGF | 1389156..1389599 (+) | 444 | WP_107543121.1 | competence type IV pilus minor pilin ComGF | - |
| DWB98_RS06640 (DWB98_06650) | - | 1389779..1390279 (+) | 501 | WP_042363549.1 | shikimate kinase | - |
| DWB98_RS06645 (DWB98_06655) | gcvT | 1390467..1391558 (+) | 1092 | WP_107543120.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37165.35 Da Isoelectric Point: 9.3719
>NTDB_id=305357 DWB98_RS06605 WP_107543212.1 1386124..1387098(+) (comGA) [Staphylococcus xylosus strain]
MKLLFNSMIEKAINNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNVKGERELVYEQITKEDIYHFFKNSYTLPKDFHNLSYKLNKMSKEGMICETSM
ERYL
MKLLFNSMIEKAINNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGNESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNVKGERELVYEQITKEDIYHFFKNSYTLPKDFHNLSYKLNKMSKEGMICETSM
ERYL
Nucleotide
Download Length: 975 bp
>NTDB_id=305357 DWB98_RS06605 WP_107543212.1 1386124..1387098(+) (comGA) [Staphylococcus xylosus strain]
TTGAAGCTATTGTTTAATAGTATGATTGAAAAGGCAATTAATAATGATGCATCAGATATTCATTTTATCCCCGCAGATAA
AGAAGTAATGATTAAATTTAGAATACGAGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACACAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCTCTAGGAAATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TGAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAGCCCGTTGAACAATTGATAAATGGCATAACTCAAATATCATTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCTGATATTATCTTGATTGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTTATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGTGTTATC
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATCACTAGCATATTAAATCAAAGGCTTATTAC
TAACGTAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATATTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGATTTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
TTGAAGCTATTGTTTAATAGTATGATTGAAAAGGCAATTAATAATGATGCATCAGATATTCATTTTATCCCCGCAGATAA
AGAAGTAATGATTAAATTTAGAATACGAGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACACAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCTCTAGGAAATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TGAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAGCCCGTTGAACAATTGATAAATGGCATAACTCAAATATCATTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCTGATATTATCTTGATTGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTTATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGTGTTATC
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATCACTAGCATATTAAATCAAAGGCTTATTAC
TAACGTAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATATTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGATTTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.654 |
100 |
0.627 |
| comGA | Staphylococcus aureus N315 |
62.654 |
100 |
0.627 |