Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DWB97_RS06140 | Genome accession | NZ_CP031274 |
| Coordinates | 1227406..1228380 (+) | Length | 324 a.a. |
| NCBI ID | WP_037573899.1 | Uniprot ID | A0AAE5T169 |
| Organism | Staphylococcus chromogenes strain 17A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1222406..1233380
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB97_RS06105 (DWB97_06130) | rpmG | 1222860..1223024 (+) | 165 | WP_255201399.1 | 50S ribosomal protein L33 | - |
| DWB97_RS06110 (DWB97_06135) | - | 1223220..1223759 (+) | 540 | WP_145400846.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| DWB97_RS06115 (DWB97_06140) | - | 1223777..1225216 (+) | 1440 | WP_145400847.1 | rhomboid family intramembrane serine protease | - |
| DWB97_RS06120 (DWB97_06145) | - | 1225218..1225421 (+) | 204 | WP_037573910.1 | YqgQ family protein | - |
| DWB97_RS06125 (DWB97_06150) | - | 1225418..1226404 (+) | 987 | WP_145400848.1 | ROK family glucokinase | - |
| DWB97_RS06130 (DWB97_06155) | - | 1226405..1226716 (+) | 312 | WP_145400849.1 | MTH1187 family thiamine-binding protein | - |
| DWB97_RS06135 (DWB97_06160) | - | 1226730..1227353 (+) | 624 | WP_145400850.1 | MBL fold metallo-hydrolase | - |
| DWB97_RS06140 (DWB97_06165) | comGA | 1227406..1228380 (+) | 975 | WP_037573899.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB97_RS06145 (DWB97_06170) | comGB | 1228349..1229416 (+) | 1068 | WP_145400851.1 | competence type IV pilus assembly protein ComGB | - |
| DWB97_RS06150 (DWB97_06175) | comGC | 1229431..1229748 (+) | 318 | WP_037573894.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB97_RS06155 (DWB97_06180) | comGD | 1229738..1230169 (+) | 432 | WP_165885688.1 | competence type IV pilus minor pilin ComGD | - |
| DWB97_RS06160 (DWB97_06185) | - | 1230362..1230847 (+) | 486 | WP_165885689.1 | competence type IV pilus minor pilin ComGF | - |
| DWB97_RS06170 (DWB97_06195) | - | 1231015..1231536 (+) | 522 | WP_186433790.1 | shikimate kinase | - |
| DWB97_RS06175 (DWB97_06200) | gcvT | 1231689..1232780 (+) | 1092 | WP_145400855.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37089.84 Da Isoelectric Point: 7.4356
>NTDB_id=305326 DWB97_RS06140 WP_037573899.1 1227406..1228380(+) (comGA) [Staphylococcus chromogenes strain 17A]
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQSLNMIVNQRLITTKNNDRRLVYETMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQSLNMIVNQRLITTKNNDRRLVYETMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
Nucleotide
Download Length: 975 bp
>NTDB_id=305326 DWB97_RS06140 WP_037573899.1 1227406..1228380(+) (comGA) [Staphylococcus chromogenes strain 17A]
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTACACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGGATAAAAGATAATTTAAAGACATTTGACACTCTGAATTTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAATTGTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGTACTGAAAGTTGTGTAATAAGAATAACGCCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGCCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGTATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACGATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACAAGATCTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAACCATGACAAGTTTAGACATTCAATACTTTCTCAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTACACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGGATAAAAGATAATTTAAAGACATTTGACACTCTGAATTTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAATTGTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGTACTGAAAGTTGTGTAATAAGAATAACGCCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGCCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGTATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACGATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACAAGATCTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAACCATGACAAGTTTAGACATTCAATACTTTCTCAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |