Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | DWB91_RS06100 | Genome accession | NZ_CP031266 |
| Coordinates | 1243635..1244609 (+) | Length | 324 a.a. |
| NCBI ID | WP_060551125.1 | Uniprot ID | - |
| Organism | Staphylococcus agnetis strain 12B | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1238635..1249609
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB91_RS06065 (DWB91_06080) | rpmG | 1239167..1239331 (+) | 165 | WP_256903594.1 | 50S ribosomal protein L33 | - |
| DWB91_RS06070 (DWB91_06085) | - | 1239444..1239983 (+) | 540 | WP_060551130.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| DWB91_RS06075 (DWB91_06090) | - | 1240001..1241440 (+) | 1440 | WP_145051802.1 | rhomboid family intramembrane serine protease | - |
| DWB91_RS06080 (DWB91_06095) | - | 1241442..1241645 (+) | 204 | WP_037567684.1 | YqgQ family protein | - |
| DWB91_RS06085 (DWB91_06100) | - | 1241642..1242628 (+) | 987 | WP_145051805.1 | ROK family glucokinase | - |
| DWB91_RS06090 (DWB91_06105) | - | 1242629..1242940 (+) | 312 | WP_060551127.1 | MTH1187 family thiamine-binding protein | - |
| DWB91_RS06095 (DWB91_06110) | - | 1242955..1243578 (+) | 624 | WP_107368912.1 | MBL fold metallo-hydrolase | - |
| DWB91_RS06100 (DWB91_06115) | comGA | 1243635..1244609 (+) | 975 | WP_060551125.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DWB91_RS06105 (DWB91_06120) | comGB | 1244578..1245645 (+) | 1068 | WP_107368913.1 | competence type IV pilus assembly protein ComGB | - |
| DWB91_RS06110 (DWB91_06125) | comGC | 1245666..1245977 (+) | 312 | WP_060552480.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DWB91_RS06115 (DWB91_06130) | comGD | 1245967..1246398 (+) | 432 | WP_186434576.1 | competence type IV pilus minor pilin ComGD | - |
| DWB91_RS06120 (DWB91_06135) | - | 1246590..1247072 (+) | 483 | WP_107368914.1 | competence type IV pilus minor pilin ComGF | - |
| DWB91_RS11580 | - | 1247041..1247253 (+) | 213 | WP_171509143.1 | hypothetical protein | - |
| DWB91_RS06125 (DWB91_06140) | - | 1247192..1247761 (+) | 570 | WP_107368917.1 | shikimate kinase | - |
| DWB91_RS06130 (DWB91_06145) | gcvT | 1247913..1249004 (+) | 1092 | WP_060551123.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36974.82 Da Isoelectric Point: 7.8369
>NTDB_id=305261 DWB91_RS06100 WP_060551125.1 1243635..1244609(+) (comGA) [Staphylococcus agnetis strain 12B]
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
MQLLIDHVVQYAIKHEASDIHFIPNSSQVEVKLRVKDHLQCFDTLNLETYQKLLTLLKFKAGLDVSSRHKAQSGRYIYEF
ETLYYLRVSTLPLNLGSESCVIRITPQLFQADFNQTAHDIQRIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKEVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQALNLIVNQRLITTNNHSRRLVYELMSQEDIQYFLNHNFLLPKNFKSLNDKLNDLQKKGEIDAHTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=305261 DWB91_RS06100 WP_060551125.1 1243635..1244609(+) (comGA) [Staphylococcus agnetis strain 12B]
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGTGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATCTTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGCGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTGTTGTTA
CGACTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATTCAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAACTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
ATGCAACTATTAATTGATCATGTTGTTCAATATGCTATTAAACATGAGGCGTCTGATATCCATTTTATCCCTAATTCATC
ACAAGTAGAGGTCAAGCTAAGAGTTAAAGATCATTTGCAATGTTTTGACACATTAAATTTAGAAACGTATCAAAAATTGT
TAACATTATTAAAATTCAAAGCAGGCCTTGATGTTTCCTCAAGACATAAAGCACAAAGCGGTCGTTACATTTACGAATTT
GAGACTTTATACTATTTACGTGTATCAACTCTACCTCTAAATTTAGGTTCTGAAAGTTGCGTGATTCGTATCACACCTCA
ACTTTTTCAAGCAGATTTCAACCAAACTGCACATGATATACAAAGAATTATGGAAAAGAAACAAGGTTTAATTTTATTTA
GTGGTCCTACTGGTGCTGGCAAGAGTACATTAATGTACCAAATGGTGGTTTATGCAAAAGAAAAACTCAATTTAAATATC
ATTACTATCGAAGATCCTGTCGAACAATTGCTAAATGGTGTAACTCAGATTTCAGTAAATGAAAAAGCTGATATCACATA
TGGCAACTCATTAAAGGCTATTTTACGTTGCGATCCCGACGTTATCTTGATTGGTGAAATTAGAGATGGATTAATTGCTA
AGGAAGTGATTCAAGCAAGTTTAAGCGGACACTTAGTTTTATCGACCATTCATGCAAATGATTGTCAAGGTGTGTTGTTA
CGACTAATCGAAATGGGGATAACTAAACAAGATTTAATTCAGGCACTCAACTTAATTGTAAATCAAAGGTTAATTACAAC
TAATAATCATTCAAGACGCTTAGTCTACGAGTTAATGTCTCAAGAAGATATTCAATACTTTTTAAACCATAATTTTTTAC
TTCCTAAAAACTTTAAAAGTCTAAATGACAAACTTAATGATTTACAAAAGAAAGGAGAGATAGATGCGCACACACTTAGA
AAATATCAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.824 |
99.691 |
0.586 |
| comGA | Staphylococcus aureus N315 |
58.824 |
99.691 |
0.586 |