Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DV129_RS08075 Genome accession   NZ_CP031247
Coordinates   1487216..1487974 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain M23734     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1482216..1492974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV129_RS08050 pth 1482249..1482818 (-) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -
  DV129_RS08055 ychF 1482889..1484004 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  DV129_RS08060 - 1484088..1484282 (-) 195 WP_000285191.1 DUF951 family protein -
  DV129_RS08065 dnaN 1484347..1485483 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  DV129_RS08070 dnaA 1485642..1487003 (-) 1362 WP_000660622.1 chromosomal replication initiator protein DnaA -
  DV129_RS08075 spo0J 1487216..1487974 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  DV129_RS08080 htrA 1488032..1489213 (-) 1182 WP_000681603.1 S1C family serine protease Regulator
  DV129_RS08085 rlmH 1489396..1489875 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DV129_RS08095 comC/comC1 1490157..1490282 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  DV129_RS08100 comD/comD1 1490303..1491628 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  DV129_RS08105 comE 1491625..1492377 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=304776 DV129_RS08075 WP_000410378.1 1487216..1487974(-) (spo0J) [Streptococcus pneumoniae strain M23734]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=304776 DV129_RS08075 WP_000410378.1 1487216..1487974(-) (spo0J) [Streptococcus pneumoniae strain M23734]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment