Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   DV441_RS01625 Genome accession   NZ_CP031238
Coordinates   369515..371881 (-) Length   788 a.a.
NCBI ID   WP_046953433.1    Uniprot ID   A0A0M3G7G7
Organism   Haemophilus haemolyticus strain M28486     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 364515..376881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV441_RS01610 kdsB 365806..366570 (-) 765 WP_005643449.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  DV441_RS01615 lpxK 366641..367639 (-) 999 WP_046953434.1 tetraacyldisaccharide 4'-kinase -
  DV441_RS01620 msbA 367711..369474 (-) 1764 WP_005627993.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  DV441_RS01625 rec2 369515..371881 (-) 2367 WP_046953433.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  DV441_RS01630 dksA 372140..372577 (+) 438 WP_005627987.1 RNA polymerase-binding protein DksA -
  DV441_RS01635 pcnB 372825..374183 (+) 1359 WP_046953458.1 polynucleotide adenylyltransferase PcnB -
  DV441_RS01640 folK 374192..374674 (+) 483 WP_046953432.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  DV441_RS01645 tsaE 374750..375226 (+) 477 WP_005627897.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DV441_RS01650 - 375234..376607 (+) 1374 WP_114892340.1 N-acetylmuramoyl-L-alanine amidase -

Sequence

Protein


Download         Length: 788 a.a.        Molecular weight: 89624.00 Da        Isoelectric Point: 9.7603

>NTDB_id=304380 DV441_RS01625 WP_046953433.1 369515..371881(-) (rec2) [Haemophilus haemolyticus strain M28486]
MKLNLITLAVLLIIADLTLLFLPQPLLLSWQVALVIALALIFLFIFVRRNFLVFLAFFVVSLGYTHHSALSLLQHAQSIT
AQKQVVTFEIQEILHQRDYQTLIATATLAGNLRAQRIFLNWKAKEVPQLSEIWQAEISLRTLSARLNFGGFDRQQWYFSK
GITAIGTVKRAVKISDVSSLRAEKLQQVKKQTEGLSLQGLLIALAFGERAWLDKNTWSIYQQTNTAHLIAISGLHIGLAM
GIGFCLARVVQVFYPTRFIHPYFPLVFGVLFALIYAYLAGFSVPTFRAISALVFVLFIQIMRRHYSPLQLFTLVVGFLLF
CDPLMPLSASFWLSCGAVGCLIVWYRYVPFSLFQWKNRPFSPKVRWILSLFHLQFGLLLFFTPLQLFIFNGLSLSGFLAN
LMAVPLYSFFLVPLILFAVFTNGAVFSWQLANKLAEGITWLISAFQGNWLNVSFNLALVLTALCAGMFMLIIWSIYREPE
ISSSTRQVKRARFFTLNLSKPLLKDERINVLRCSFGIMSLCFMILLFKQLSKPTWQVDTLDVGQGLATLIVKNGKGILYD
TGPAWQSGNMAELEILPYLQREGITLEKLILSHDDNDHAGGASAILKTYPNVEFITPSQRNYWENYRTFCTAGRDWDWQE
LHFQILSPHSIVERADNAHSCVILVDDGKHSVLLTGDAEVKNEQIFARTLGKIDMLQVGHHGSKTSTSEYLLSQIRPDVA
IISSGRWNPWKFPHYSVIERLQRYKSAVENTAISGQVRVNFFKDRLEIQQARTEFSPWYARVIGFSSE

Nucleotide


Download         Length: 2367 bp        

>NTDB_id=304380 DV441_RS01625 WP_046953433.1 369515..371881(-) (rec2) [Haemophilus haemolyticus strain M28486]
ATGAAATTAAACTTAATAACTTTAGCTGTCTTGTTGATTATTGCGGATTTAACGTTGTTATTTCTACCACAACCGTTGCT
ATTGTCTTGGCAAGTTGCTCTGGTTATTGCGCTTGCCTTGATTTTTCTTTTTATCTTTGTGCGCAGAAACTTTTTGGTTT
TTCTTGCTTTTTTTGTTGTTTCTCTCGGTTATACGCATCATTCAGCACTCAGCTTGTTACAACATGCCCAAAGTATTACC
GCTCAAAAACAAGTGGTGACGTTTGAGATTCAAGAAATTTTGCACCAGCGGGATTATCAAACGCTTATCGCAACAGCAAC
ATTGGCGGGTAACTTGCGAGCGCAACGAATTTTTTTAAATTGGAAGGCAAAAGAGGTGCCTCAATTATCCGAAATTTGGC
AAGCGGAAATTTCCTTACGCACACTTTCTGCGCGATTAAATTTTGGTGGATTTGATCGGCAACAATGGTATTTTTCAAAG
GGGATTACTGCTATTGGAACCGTAAAACGTGCGGTGAAAATTTCTGATGTTTCATCATTGCGCGCAGAAAAATTGCAACA
AGTAAAGAAGCAAACGGAAGGATTATCTCTACAAGGTTTATTGATCGCGTTAGCTTTTGGTGAACGGGCTTGGTTAGATA
AAAACACTTGGTCAATTTACCAACAAACGAATACCGCACATCTTATTGCTATTTCTGGCTTACATATTGGGTTGGCTATG
GGGATTGGATTTTGCTTGGCGCGTGTTGTGCAAGTATTTTACCCCACCCGTTTTATTCATCCTTATTTTCCTTTAGTTTT
TGGTGTTTTATTTGCTTTAATTTATGCGTATTTGGCTGGTTTTAGCGTGCCCACTTTTCGTGCCATTTCAGCACTTGTTT
TCGTTTTATTCATTCAAATAATGAGGCGACATTATTCGCCCCTTCAGCTTTTTACATTGGTTGTCGGATTCTTGCTTTTC
TGCGATCCATTAATGCCGCTTTCGGCCAGTTTTTGGCTTTCTTGTGGTGCAGTTGGTTGTTTAATTGTCTGGTATCGTTA
TGTGCCTTTTTCTCTTTTTCAATGGAAAAATCGACCCTTTTCACCAAAAGTGCGGTGGATTTTGAGTTTATTTCATTTGC
AATTTGGGCTATTGCTCTTTTTTACGCCTTTGCAACTTTTTATATTTAATGGCTTATCGCTGAGTGGGTTTTTAGCCAAT
CTTATGGCTGTACCACTTTATAGCTTTTTCCTCGTGCCATTGATTTTATTTGCTGTTTTTACTAACGGTGCGGTTTTTTC
TTGGCAACTTGCAAATAAGCTAGCCGAAGGAATTACTTGGTTAATTTCTGCTTTTCAAGGGAATTGGTTAAATGTTTCAT
TTAATTTAGCGCTGGTTCTAACCGCACTTTGTGCGGGAATGTTTATGTTAATTATTTGGAGTATTTACCGAGAACCCGAG
ATTTCATCATCAACCAGGCAAGTAAAACGAGCAAGATTTTTTACATTAAATCTTAGTAAACCTTTGCTAAAAGATGAGCG
AATCAACGTTTTGCGATGTTCTTTCGGCATTATGTCGCTTTGTTTTATGATTTTGTTGTTTAAACAATTGAGCAAGCCAA
CTTGGCAGGTAGATACTTTAGATGTGGGGCAAGGCTTGGCAACGTTGATTGTGAAAAATGGTAAAGGGATTCTCTATGAT
ACAGGCCCAGCATGGCAAAGTGGAAATATGGCTGAATTAGAAATTTTGCCTTATTTGCAAAGAGAAGGGATTACTTTGGA
AAAGTTGATTTTGAGCCACGATGATAACGATCATGCAGGTGGTGCTTCGGCAATTTTAAAGACGTATCCCAATGTGGAAT
TTATTACCCCTTCACAAAGAAATTATTGGGAAAATTACCGCACTTTTTGTACTGCTGGACGTGATTGGGATTGGCAAGAG
CTACATTTTCAAATACTTTCGCCGCATTCTATTGTGGAGCGAGCAGATAATGCCCATTCTTGTGTGATTTTAGTCGATGA
TGGAAAGCATAGCGTTTTGCTAACTGGCGATGCTGAAGTAAAAAATGAGCAAATTTTTGCCCGCACTTTAGGAAAAATTG
ATATGTTACAAGTGGGGCATCATGGGAGTAAAACATCGACAAGTGAATACTTGCTTTCTCAGATTAGACCAGATGTGGCG
ATTATTTCTAGTGGACGTTGGAATCCGTGGAAATTCCCTCATTATTCGGTTATAGAAAGGCTTCAACGCTATAAAAGTGC
GGTAGAAAATACCGCTATTTCAGGGCAAGTACGGGTAAATTTTTTTAAAGACCGATTAGAAATCCAACAAGCACGCACAG
AATTTTCCCCTTGGTATGCGCGTGTAATTGGATTCTCGAGCGAATAA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(204-473)

Metallo-beta-lactamase superfamily (Lactamase_B)

(541-725)

Domain of unknown function (DUF4131) (DUF4131)

(28-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M3G7G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

89.975

100

0.9

Multiple sequence alignment