Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | HYN46_RS03020 | Genome accession | NZ_CP031222 |
| Coordinates | 673874..674509 (+) | Length | 211 a.a. |
| NCBI ID | WP_114898044.1 | Uniprot ID | A0A345P3S5 |
| Organism | Aquirhabdus parva strain HYN0046 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 668874..679509
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HYN46_RS03010 (HYN46_03010) | - | 669653..672352 (-) | 2700 | WP_114898042.1 | penicillin-binding protein 1A | - |
| HYN46_RS03015 (HYN46_03015) | pilM | 672813..673871 (+) | 1059 | WP_114898043.1 | pilus assembly protein PilM | Machinery gene |
| HYN46_RS03020 (HYN46_03020) | pilN | 673874..674509 (+) | 636 | WP_114898044.1 | PilN domain-containing protein | Machinery gene |
| HYN46_RS03025 (HYN46_03025) | pilO | 674506..675222 (+) | 717 | WP_114898045.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HYN46_RS03030 (HYN46_03030) | pilP | 675321..675809 (+) | 489 | WP_228254924.1 | pilus assembly protein PilP | Machinery gene |
| HYN46_RS03035 (HYN46_03035) | pilQ | 675972..678182 (+) | 2211 | WP_407640785.1 | type IV pilus secretin PilQ | Machinery gene |
| HYN46_RS03040 (HYN46_03040) | aroK | 678227..678799 (+) | 573 | WP_114900556.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23684.11 Da Isoelectric Point: 8.4848
>NTDB_id=304159 HYN46_RS03020 WP_114898044.1 673874..674509(+) (pilN) [Aquirhabdus parva strain HYN0046]
MAQINLLPWREAQREQRKKEFMLTGGAIFVLALILSVLVWMVFKHYLDEQLQANQQITTANAALDTKLKDLAQLQSRRDD
IVSRMKVIQDLQGQRPVVVRIFDELPRLTPSHVYITKFARKDDKFTIEGRAQSPNDVSEFLRNLEASPWFRNAFMNSFQG
AVEPATPVSGGVVPRAEDSYGQFVISVDLQLPETDVKGQGASTAKHLGGAS
MAQINLLPWREAQREQRKKEFMLTGGAIFVLALILSVLVWMVFKHYLDEQLQANQQITTANAALDTKLKDLAQLQSRRDD
IVSRMKVIQDLQGQRPVVVRIFDELPRLTPSHVYITKFARKDDKFTIEGRAQSPNDVSEFLRNLEASPWFRNAFMNSFQG
AVEPATPVSGGVVPRAEDSYGQFVISVDLQLPETDVKGQGASTAKHLGGAS
Nucleotide
Download Length: 636 bp
>NTDB_id=304159 HYN46_RS03020 WP_114898044.1 673874..674509(+) (pilN) [Aquirhabdus parva strain HYN0046]
ATGGCACAAATTAATTTACTTCCCTGGCGCGAAGCTCAGCGTGAGCAGCGCAAAAAAGAATTTATGCTCACGGGTGGCGC
TATTTTTGTTTTGGCTTTGATTCTGTCTGTTTTGGTCTGGATGGTCTTTAAACATTATCTTGATGAACAGCTCCAAGCCA
ATCAACAGATTACTACTGCAAATGCAGCACTCGATACGAAGCTGAAAGATTTGGCGCAATTACAGTCCAGACGTGATGAC
ATTGTTTCACGGATGAAAGTGATTCAAGATTTACAAGGCCAGCGTCCAGTTGTGGTTCGTATTTTCGATGAATTGCCAAG
ATTGACGCCGAGTCATGTCTATATCACTAAATTTGCACGGAAAGATGACAAGTTTACGATCGAAGGCCGAGCACAAAGTC
CAAATGATGTATCTGAGTTTTTACGTAATTTGGAAGCATCTCCATGGTTCCGGAATGCATTTATGAATTCATTTCAAGGT
GCTGTAGAGCCCGCTACGCCAGTGTCTGGCGGTGTTGTGCCGAGAGCAGAGGATAGCTATGGTCAGTTTGTGATTTCAGT
TGATTTGCAACTTCCTGAAACTGATGTAAAAGGACAAGGAGCTTCGACTGCGAAGCATTTAGGAGGTGCATCATGA
ATGGCACAAATTAATTTACTTCCCTGGCGCGAAGCTCAGCGTGAGCAGCGCAAAAAAGAATTTATGCTCACGGGTGGCGC
TATTTTTGTTTTGGCTTTGATTCTGTCTGTTTTGGTCTGGATGGTCTTTAAACATTATCTTGATGAACAGCTCCAAGCCA
ATCAACAGATTACTACTGCAAATGCAGCACTCGATACGAAGCTGAAAGATTTGGCGCAATTACAGTCCAGACGTGATGAC
ATTGTTTCACGGATGAAAGTGATTCAAGATTTACAAGGCCAGCGTCCAGTTGTGGTTCGTATTTTCGATGAATTGCCAAG
ATTGACGCCGAGTCATGTCTATATCACTAAATTTGCACGGAAAGATGACAAGTTTACGATCGAAGGCCGAGCACAAAGTC
CAAATGATGTATCTGAGTTTTTACGTAATTTGGAAGCATCTCCATGGTTCCGGAATGCATTTATGAATTCATTTCAAGGT
GCTGTAGAGCCCGCTACGCCAGTGTCTGGCGGTGTTGTGCCGAGAGCAGAGGATAGCTATGGTCAGTTTGTGATTTCAGT
TGATTTGCAACTTCCTGAAACTGATGTAAAAGGACAAGGAGCTTCGACTGCGAAGCATTTAGGAGGTGCATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
57.672 |
89.573 |
0.517 |
| comN | Acinetobacter baylyi ADP1 |
55.556 |
89.573 |
0.498 |