Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DVH03_RS08115 Genome accession   NZ_CP031140
Coordinates   1637021..1638298 (+) Length   425 a.a.
NCBI ID   WP_135517080.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain UNQLp11     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1632021..1643298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DVH03_RS08090 (DVH03_08120) tsf 1632917..1633795 (+) 879 WP_135517078.1 translation elongation factor Ts -
  DVH03_RS08095 (DVH03_08125) pyrH 1633996..1634718 (+) 723 WP_003640737.1 UMP kinase -
  DVH03_RS08100 (DVH03_08130) frr 1634720..1635283 (+) 564 WP_003640736.1 ribosome recycling factor -
  DVH03_RS08105 (DVH03_08135) - 1635403..1636182 (+) 780 WP_135517079.1 isoprenyl transferase -
  DVH03_RS08110 (DVH03_08140) - 1636198..1636983 (+) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  DVH03_RS08115 (DVH03_08145) eeP 1637021..1638298 (+) 1278 WP_135517080.1 RIP metalloprotease RseP Regulator
  DVH03_RS08120 (DVH03_08150) - 1638338..1640047 (+) 1710 WP_003640732.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45835.37 Da        Isoelectric Point: 9.5616

>NTDB_id=303689 DVH03_RS08115 WP_135517080.1 1637021..1638298(+) (eeP) [Lactiplantibacillus plantarum strain UNQLp11]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLVYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFL

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=303689 DVH03_RS08115 WP_135517080.1 1637021..1638298(+) (eeP) [Lactiplantibacillus plantarum strain UNQLp11]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGAGCCAAGTTAGTATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATTTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTGTTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCCTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.598

100

0.489
  eeP Streptococcus thermophilus LMD-9

48.598

100

0.489

Multiple sequence alignment