Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT44_RS02445 Genome accession   NZ_CP035455
Coordinates   449254..450288 (+) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 444254..455288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS02415 (ETT44_02415) tsaE 445319..445780 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT44_RS02420 (ETT44_02420) - 445755..446279 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  ETT44_RS02425 (ETT44_02425) - 446288..447571 (+) 1284 WP_002994335.1 LCP family protein -
  ETT44_RS02430 (ETT44_02430) - 447682..448038 (-) 357 WP_115219621.1 chemotaxis protein -
  ETT44_RS02435 (ETT44_02435) - 448035..448454 (-) 420 WP_002983376.1 HIT family protein -
  ETT44_RS02440 (ETT44_02440) pptA 448526..449251 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT44_RS02445 (ETT44_02445) pptB 449254..450288 (+) 1035 WP_002994331.1 ABC transporter permease Regulator
  ETT44_RS02450 (ETT44_02450) ccrZ 450352..451143 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT44_RS02455 (ETT44_02455) trmB 451143..451778 (+) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT44_RS02465 (ETT44_02465) rimP 452037..452573 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT44_RS02470 (ETT44_02470) nusA 452749..453906 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT44_RS02475 (ETT44_02475) - 453922..454218 (+) 297 WP_002983486.1 YlxR family protein -
  ETT44_RS02480 (ETT44_02480) - 454211..454513 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=303546 ETT44_RS02445 WP_002994331.1 449254..450288(+) (pptB) [Streptococcus pyogenes strain emm197]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=303546 ETT44_RS02445 WP_002994331.1 449254..450288(+) (pptB) [Streptococcus pyogenes strain emm197]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTATGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment