Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   BLDA23_RS08895 Genome accession   NZ_CP031126
Coordinates   1702136..1702597 (-) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus licheniformis strain 0DA23-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1697136..1707597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLDA23_RS08875 (BLDA23_08875) - 1697482..1698651 (-) 1170 WP_003181276.1 aminotransferase A -
  BLDA23_RS23210 - 1698843..1699001 (-) 159 WP_016885792.1 hypothetical protein -
  BLDA23_RS08880 (BLDA23_08880) - 1699173..1699697 (+) 525 WP_003181280.1 RDD family protein -
  BLDA23_RS08885 (BLDA23_08885) - 1699794..1701113 (+) 1320 WP_080626908.1 MFS transporter -
  BLDA23_RS08890 (BLDA23_08890) - 1701187..1702104 (+) 918 WP_003181284.1 chemotaxis protein -
  BLDA23_RS08895 (BLDA23_08895) kre 1702136..1702597 (-) 462 WP_003181285.1 YkyB family protein Regulator
  BLDA23_RS08900 (BLDA23_08900) - 1702739..1704040 (-) 1302 WP_003181287.1 MFS transporter -
  BLDA23_RS08905 (BLDA23_08905) - 1704129..1704626 (-) 498 WP_003181289.1 L,D-transpeptidase family protein -
  BLDA23_RS08915 (BLDA23_08915) - 1704806..1705663 (-) 858 WP_003181293.1 metallophosphoesterase -
  BLDA23_RS08920 (BLDA23_08920) fadH 1705809..1706573 (+) 765 WP_003181295.1 2,4-dienoyl-CoA reductase -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=303532 BLDA23_RS08895 WP_003181285.1 1702136..1702597(-) (kre) [Bacillus licheniformis strain 0DA23-1]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=303532 BLDA23_RS08895 WP_003181285.1 1702136..1702597(-) (kre) [Bacillus licheniformis strain 0DA23-1]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAACCGCCA
TGCGAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAAG
GTAAAAAGGTAGGCCTGCATTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATATCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATCAAAGAAAAACCGCTCGTCA
CAAACCGGAAGCGTCCAGCCTCAAAACCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83


Multiple sequence alignment