Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ETT45_RS06825 Genome accession   NZ_CP035454
Coordinates   1333064..1334098 (-) Length   344 a.a.
NCBI ID   WP_136129642.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm54     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1328064..1339098
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT45_RS06790 (ETT45_06785) - 1328839..1329141 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT45_RS06795 (ETT45_06790) rnpM 1329134..1329430 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT45_RS06800 (ETT45_06795) nusA 1329446..1330603 (-) 1158 WP_136129643.1 transcription termination factor NusA -
  ETT45_RS06805 (ETT45_06800) rimP 1330778..1331314 (-) 537 WP_030127299.1 ribosome maturation factor RimP -
  ETT45_RS06815 (ETT45_06810) trmB 1331574..1332209 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT45_RS06820 (ETT45_06815) ccrZ 1332209..1333000 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT45_RS06825 (ETT45_06820) pptB 1333064..1334098 (-) 1035 WP_136129642.1 ABC transporter permease Regulator
  ETT45_RS06830 (ETT45_06825) pptA 1334101..1334826 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT45_RS06835 (ETT45_06830) - 1334898..1335317 (+) 420 WP_002988659.1 HIT family protein -
  ETT45_RS06840 (ETT45_06835) - 1335314..1335670 (+) 357 WP_002988657.1 hypothetical protein -
  ETT45_RS06845 (ETT45_06840) - 1335781..1337064 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT45_RS06850 (ETT45_06845) - 1337073..1337597 (-) 525 WP_136129641.1 GNAT family N-acetyltransferase -
  ETT45_RS06855 (ETT45_06850) tsaE 1337572..1338033 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40257.51 Da        Isoelectric Point: 10.4168

>NTDB_id=303486 ETT45_RS06825 WP_136129642.1 1333064..1334098(-) (pptB) [Streptococcus pyogenes strain emm54]
MKALFLKRRQNFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILILLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=303486 ETT45_RS06825 WP_136129642.1 1333064..1334098(-) (pptB) [Streptococcus pyogenes strain emm54]
ATGAAAGCATTATTTCTGAAACGCCGTCAAAACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCTATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.314

100

0.433
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43