Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BCENMC03_RS14290 | Genome accession | NC_010508 |
| Coordinates | 3138882..3140048 (+) | Length | 388 a.a. |
| NCBI ID | WP_012329249.1 | Uniprot ID | B1JYQ6 |
| Organism | Burkholderia orbicola MC0-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3133882..3145048
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCENMC03_RS14260 (Bcenmc03_2814) | - | 3134528..3135133 (+) | 606 | WP_011546248.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| BCENMC03_RS14265 (Bcenmc03_2815) | pth | 3135254..3135853 (+) | 600 | WP_006477776.1 | aminoacyl-tRNA hydrolase | - |
| BCENMC03_RS14270 (Bcenmc03_2816) | hisC | 3135971..3137038 (+) | 1068 | WP_041492024.1 | histidinol-phosphate transaminase | - |
| BCENMC03_RS14275 (Bcenmc03_2817) | - | 3137116..3137382 (-) | 267 | WP_006477774.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| BCENMC03_RS14280 (Bcenmc03_2818) | coaD | 3137442..3137939 (-) | 498 | WP_006477773.1 | pantetheine-phosphate adenylyltransferase | - |
| BCENMC03_RS14285 (Bcenmc03_2819) | rsmD | 3138051..3138665 (-) | 615 | WP_012329248.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BCENMC03_RS14290 (Bcenmc03_2820) | pilA | 3138882..3140048 (+) | 1167 | WP_012329249.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BCENMC03_RS14295 (Bcenmc03_2821) | maiA | 3140144..3140788 (-) | 645 | WP_011546253.1 | maleylacetoacetate isomerase | - |
| BCENMC03_RS14300 (Bcenmc03_2822) | ybiB | 3140970..3141944 (+) | 975 | WP_012329250.1 | DNA-binding protein YbiB | - |
| BCENMC03_RS14305 (Bcenmc03_2823) | leuA | 3142322..3143968 (+) | 1647 | WP_012329251.1 | 2-isopropylmalate synthase | - |
| BCENMC03_RS14310 (Bcenmc03_2824) | - | 3144111..3144494 (-) | 384 | WP_012329252.1 | nuclear transport factor 2 family protein | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 41289.17 Da Isoelectric Point: 4.6402
>NTDB_id=30340 BCENMC03_RS14290 WP_012329249.1 3138882..3140048(+) (pilA) [Burkholderia orbicola MC0-3]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPQVSAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
MFSFFKRFKKTQEPDPAESQSADAQQADEASDAAEAAPVLDAPPAADVPQVSAQPAAPAVVMTVTPTNDGRDEVVETVEI
VPPPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLDALREKVRAGRLTDPQ
QVKDALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGE
RNNVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQN
ALTQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
Nucleotide
Download Length: 1167 bp
>NTDB_id=30340 BCENMC03_RS14290 WP_012329249.1 3138882..3140048(+) (pilA) [Burkholderia orbicola MC0-3]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCGGCCGAAGCGGCGCCCGTGCTCGACGCGCCGCCCGCGGCCGACGTGCCGCAGGTGAGCGCGC
AACCGGCCGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATC
GTCCCGCCGCCGCTGCAGGACGCCTCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTC
GAGCATCACCGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCG
ACGCGGGCGTCGACGCGACCGAATACCTGCTCGACGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAG
CAGGTGAAGGATGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCA
GCCGCTCGTGATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGA
GCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGC
GCGCAAGATCGACGTGATGATGGCCGATACGGCCGGCCGCCTGCCGACGCAACTCCACCTGATGGAAGAGCTGAAGAAGG
TGAAGCGTGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTACTGCTGGTGATCGACGCGAACACCGGCCAGAAC
GCGCTCACGCAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGTCTGATCGTCACGAAGCTCGACGGCACCGCGAA
GGGCGGGATTCTCGCGGCGATCGCACGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACC
TGCAGCCGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCGGCCGAAGCGGCGCCCGTGCTCGACGCGCCGCCCGCGGCCGACGTGCCGCAGGTGAGCGCGC
AACCGGCCGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATC
GTCCCGCCGCCGCTGCAGGACGCCTCGGCGAAGAAATCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTC
GAGCATCACCGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAACTCGAAACCGCGCTGCTGATGTCCG
ACGCGGGCGTCGACGCGACCGAATACCTGCTCGACGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAG
CAGGTGAAGGATGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCA
GCCGCTCGTGATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGA
GCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGC
GCGCAAGATCGACGTGATGATGGCCGATACGGCCGGCCGCCTGCCGACGCAACTCCACCTGATGGAAGAGCTGAAGAAGG
TGAAGCGTGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTACTGCTGGTGATCGACGCGAACACCGGCCAGAAC
GCGCTCACGCAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGTCTGATCGTCACGAAGCTCGACGGCACCGCGAA
GGGCGGGATTCTCGCGGCGATCGCACGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACC
TGCAGCCGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.571 |
100 |
0.58 |