Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   DN409_RS06120 Genome accession   NZ_CP031071
Coordinates   1183559..1184242 (+) Length   227 a.a.
NCBI ID   WP_002030378.1    Uniprot ID   A0A0A0WR99
Organism   Bacillus mycoides strain BPN401     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1178559..1189242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN409_RS06095 (DN409_06090) - 1179543..1181189 (+) 1647 WP_061689039.1 peptide ABC transporter substrate-binding protein -
  DN409_RS06100 (DN409_06095) - 1181219..1181422 (-) 204 WP_000559981.1 hypothetical protein -
  DN409_RS06110 (DN409_06105) spx 1182002..1182397 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  DN409_RS06115 (DN409_06110) - 1182448..1183122 (-) 675 WP_002030376.1 TerC family protein -
  DN409_RS06120 (DN409_06115) mecA 1183559..1184242 (+) 684 WP_002030378.1 adaptor protein MecA Regulator
  DN409_RS06125 (DN409_06120) - 1184315..1185859 (+) 1545 WP_061689041.1 cardiolipin synthase -
  DN409_RS06130 (DN409_06125) - 1185951..1187186 (+) 1236 WP_061674936.1 competence protein CoiA -
  DN409_RS06135 (DN409_06130) pepF 1187237..1189063 (+) 1827 WP_002134970.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27043.20 Da        Isoelectric Point: 4.0116

>NTDB_id=303205 DN409_RS06120 WP_002030378.1 1183559..1184242(+) (mecA) [Bacillus mycoides strain BPN401]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQIGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=303205 DN409_RS06120 WP_002030378.1 1183559..1184242(+) (mecA) [Bacillus mycoides strain BPN401]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAATAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A0WR99

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment