Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ETT51_RS07255 Genome accession   NZ_CP035448
Coordinates   1420368..1421402 (-) Length   344 a.a.
NCBI ID   WP_020837588.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1415368..1426402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS07220 (ETT51_07340) - 1416144..1416446 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT51_RS07225 (ETT51_07345) rnpM 1416439..1416735 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT51_RS07230 (ETT51_07350) nusA 1416751..1417908 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  ETT51_RS07235 (ETT51_07355) rimP 1418083..1418619 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT51_RS07245 (ETT51_07365) trmB 1418878..1419513 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT51_RS07250 (ETT51_07370) ccrZ 1419513..1420304 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT51_RS07255 (ETT51_07375) pptB 1420368..1421402 (-) 1035 WP_020837588.1 ABC transporter permease Regulator
  ETT51_RS07260 (ETT51_07380) pptA 1421405..1422130 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT51_RS07265 (ETT51_07385) - 1422202..1422621 (+) 420 WP_038432458.1 HIT family protein -
  ETT51_RS07270 (ETT51_07390) - 1422618..1422974 (+) 357 WP_002988657.1 hypothetical protein -
  ETT51_RS07275 (ETT51_07395) brpA 1423085..1424359 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT51_RS07280 (ETT51_07400) - 1424368..1424892 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  ETT51_RS07285 (ETT51_07405) tsaE 1424867..1425328 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40260.49 Da        Isoelectric Point: 10.3713

>NTDB_id=302908 ETT51_RS07255 WP_020837588.1 1420368..1421402(-) (pptB) [Streptococcus pyogenes strain emm70]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=302908 ETT51_RS07255 WP_020837588.1 1420368..1421402(-) (pptB) [Streptococcus pyogenes strain emm70]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427