Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ETT52_RS07125 Genome accession   NZ_CP035447
Coordinates   1382172..1383206 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain emm97.1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1377172..1388206
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS07090 (ETT52_07080) - 1377948..1378250 (-) 303 WP_115224945.1 YlxQ-related RNA-binding protein -
  ETT52_RS07095 (ETT52_07085) - 1378243..1378539 (-) 297 WP_002983486.1 YlxR family protein -
  ETT52_RS07100 (ETT52_07090) nusA 1378555..1379712 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT52_RS07105 (ETT52_07095) rimP 1379887..1380423 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT52_RS07115 (ETT52_07105) trmB 1380682..1381317 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT52_RS07120 (ETT52_07110) ccrZ 1381317..1382108 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT52_RS07125 (ETT52_07115) pptB 1382172..1383206 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  ETT52_RS07130 (ETT52_07120) pptA 1383209..1383934 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT52_RS07135 (ETT52_07125) - 1384006..1384425 (+) 420 WP_136109061.1 HIT family protein -
  ETT52_RS07140 (ETT52_07130) - 1384422..1384778 (+) 357 WP_002988657.1 hypothetical protein -
  ETT52_RS07145 (ETT52_07135) - 1384889..1386163 (-) 1275 WP_136109062.1 LCP family protein -
  ETT52_RS07150 (ETT52_07140) - 1386172..1386696 (-) 525 WP_009880752.1 GNAT family N-acetyltransferase -
  ETT52_RS07155 (ETT52_07145) tsaE 1386671..1387132 (-) 462 WP_136109063.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=302811 ETT52_RS07125 WP_010922583.1 1382172..1383206(-) (pptB) [Streptococcus pyogenes strain emm97.1]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=302811 ETT52_RS07125 WP_010922583.1 1382172..1383206(-) (pptB) [Streptococcus pyogenes strain emm97.1]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427