Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   ETT53_RS02780 Genome accession   NZ_CP035446
Coordinates   520356..520997 (+) Length   213 a.a.
NCBI ID   WP_002983671.1    Uniprot ID   A0A0H2UW05
Organism   Streptococcus pyogenes strain emm68.2     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 515356..525997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT53_RS02760 (ETT53_02760) - 515912..516652 (+) 741 WP_002983660.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  ETT53_RS02765 (ETT53_02765) pknB 516649..518547 (+) 1899 WP_002994648.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  ETT53_RS02770 (ETT53_02770) liaF 518670..519362 (+) 693 WP_011054833.1 cell wall-active antibiotics response protein LiaF -
  ETT53_RS02775 (ETT53_02775) - 519359..520363 (+) 1005 WP_129321337.1 sensor histidine kinase -
  ETT53_RS02780 (ETT53_02780) vraR 520356..520997 (+) 642 WP_002983671.1 response regulator transcription factor Regulator
  ETT53_RS02785 (ETT53_02785) - 521034..522434 (+) 1401 WP_011054832.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  ETT53_RS02790 (ETT53_02790) - 522434..522811 (+) 378 WP_129321338.1 S1 RNA-binding domain-containing protein -
  ETT53_RS02795 (ETT53_02795) cysK 522829..523770 (-) 942 WP_011285046.1 cysteine synthase A -
  ETT53_RS02800 (ETT53_02800) - 523898..524530 (-) 633 WP_002988970.1 YigZ family protein -
  ETT53_RS02805 (ETT53_02805) comFA/cflA 524586..525911 (+) 1326 WP_129321339.1 DEAD/DEAH box helicase Machinery gene

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 23751.43 Da        Isoelectric Point: 5.1641

>NTDB_id=302687 ETT53_RS02780 WP_002983671.1 520356..520997(+) (vraR) [Streptococcus pyogenes strain emm68.2]
MSKIKVILVDDHEMVRMGLKSFLNLQADIDVVGEASNGREGVDLALALKPDVLVMDLVMPELGGVEATLEVLKKWKEAKV
LVLTSYLDNEKIYPVIDAGAKGYMLKTSSAAEILNAIRKVSKGELAIETEVDKKIKAHDQHPDLHEELTAREYDILHLLA
KGYDNQTIADELFISLKTVKTHVSNILAKLEVDDRTQAVVYAFRHHLVPQDDN

Nucleotide


Download         Length: 642 bp        

>NTDB_id=302687 ETT53_RS02780 WP_002983671.1 520356..520997(+) (vraR) [Streptococcus pyogenes strain emm68.2]
ATGAGTAAGATAAAAGTGATATTGGTCGATGATCATGAAATGGTCCGCATGGGACTCAAGAGTTTTTTGAATTTACAAGC
TGATATTGATGTCGTTGGTGAGGCCTCTAATGGACGTGAAGGGGTTGATTTGGCATTGGCTTTGAAGCCAGATGTTTTGG
TTATGGATCTAGTGATGCCAGAGTTAGGCGGTGTTGAGGCAACTTTAGAAGTCCTAAAAAAATGGAAAGAGGCTAAGGTA
CTTGTGTTAACTTCCTATCTAGATAATGAAAAGATATACCCTGTCATTGATGCAGGAGCGAAGGGTTATATGTTAAAAAC
ATCGAGTGCGGCTGAAATTTTAAATGCCATTCGCAAGGTTTCAAAGGGAGAGTTAGCTATTGAAACAGAAGTTGACAAAA
AAATTAAGGCGCATGATCAACACCCTGACTTGCATGAGGAACTAACAGCGCGTGAGTATGATATTTTACACCTTTTAGCT
AAAGGGTATGATAATCAGACCATTGCTGATGAACTCTTTATTTCCTTAAAAACCGTCAAAACACATGTGTCCAATATTCT
AGCCAAGTTAGAAGTTGATGACCGAACCCAAGCGGTTGTCTATGCTTTTCGACACCATTTAGTCCCCCAAGACGATAATT
AA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-118)

Bacterial regulatory proteins, luxR family (GerE)

(148-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UW05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

52.913

96.714

0.512
  degU Bacillus subtilis subsp. subtilis str. 168

36.283

100

0.385