Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT55_RS06835 Genome accession   NZ_CP035444
Coordinates   1352699..1353733 (-) Length   344 a.a.
NCBI ID   WP_030126324.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm90.5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1347699..1358733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS06800 (ETT55_06790) - 1348475..1348777 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT55_RS06805 (ETT55_06795) - 1348770..1349066 (-) 297 WP_002983486.1 YlxR family protein -
  ETT55_RS06810 (ETT55_06800) nusA 1349082..1350239 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  ETT55_RS06815 (ETT55_06805) rimP 1350414..1350950 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT55_RS06825 (ETT55_06815) trmB 1351209..1351844 (-) 636 WP_011018101.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT55_RS06830 (ETT55_06820) ccrZ 1351844..1352635 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT55_RS06835 (ETT55_06825) pptB 1352699..1353733 (-) 1035 WP_030126324.1 ABC transporter permease Regulator
  ETT55_RS06840 (ETT55_06830) pptA 1353736..1354461 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT55_RS06845 (ETT55_06835) - 1354533..1354952 (+) 420 WP_002983376.1 HIT family protein -
  ETT55_RS06850 (ETT55_06840) - 1354949..1355305 (+) 357 WP_030126323.1 hypothetical protein -
  ETT55_RS06855 (ETT55_06845) - 1355416..1356699 (-) 1284 WP_030126322.1 LCP family protein -
  ETT55_RS06860 (ETT55_06850) - 1356708..1357232 (-) 525 WP_030126321.1 GNAT family N-acetyltransferase -
  ETT55_RS06865 (ETT55_06855) tsaE 1357207..1357668 (-) 462 WP_030126320.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40214.40 Da        Isoelectric Point: 10.3713

>NTDB_id=302530 ETT55_RS06835 WP_030126324.1 1352699..1353733(-) (pptB) [Streptococcus pyogenes strain emm90.5]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVALSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=302530 ETT55_RS06835 WP_030126324.1 1352699..1353733(-) (pptB) [Streptococcus pyogenes strain emm90.5]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGCGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTACTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427