Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT59_RS02220 Genome accession   NZ_CP035440
Coordinates   419764..420798 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain emm124     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 414764..425798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS02190 (ETT59_02190) tsaE 415829..416290 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT59_RS02195 (ETT59_02195) - 416265..416789 (+) 525 WP_032460224.1 GNAT family N-acetyltransferase -
  ETT59_RS02200 (ETT59_02200) - 416798..418081 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT59_RS02205 (ETT59_02205) - 418192..418548 (-) 357 WP_136267484.1 chemotaxis protein -
  ETT59_RS02210 (ETT59_02210) - 418545..418964 (-) 420 WP_002983376.1 HIT family protein -
  ETT59_RS02215 (ETT59_02215) pptA 419036..419761 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT59_RS02220 (ETT59_02220) pptB 419764..420798 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  ETT59_RS02225 (ETT59_02225) ccrZ 420862..421653 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT59_RS02230 (ETT59_02230) trmB 421653..422288 (+) 636 WP_136267486.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT59_RS02240 (ETT59_02240) rimP 422547..423083 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT59_RS02245 (ETT59_02245) nusA 423258..424415 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT59_RS02250 (ETT59_02250) rnpM 424431..424727 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT59_RS02255 (ETT59_02255) - 424720..425022 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=302114 ETT59_RS02220 WP_010922583.1 419764..420798(+) (pptB) [Streptococcus pyogenes strain emm124]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=302114 ETT59_RS02220 WP_010922583.1 419764..420798(+) (pptB) [Streptococcus pyogenes strain emm124]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment