Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT60_RS07130 Genome accession   NZ_CP035439
Coordinates   1385716..1386750 (-) Length   344 a.a.
NCBI ID   WP_136038773.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm77     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1380716..1391750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT60_RS07095 (ETT60_07085) - 1381492..1381794 (-) 303 WP_011285079.1 YlxQ-related RNA-binding protein -
  ETT60_RS07100 (ETT60_07090) - 1381787..1382083 (-) 297 WP_002983486.1 YlxR family protein -
  ETT60_RS07105 (ETT60_07095) nusA 1382099..1383256 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  ETT60_RS07110 (ETT60_07100) rimP 1383431..1383967 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT60_RS07120 (ETT60_07110) trmB 1384226..1384861 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT60_RS07125 (ETT60_07115) ccrZ 1384861..1385652 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT60_RS07130 (ETT60_07120) pptB 1385716..1386750 (-) 1035 WP_136038773.1 ABC transporter permease Regulator
  ETT60_RS07135 (ETT60_07125) pptA 1386753..1387478 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT60_RS07140 (ETT60_07130) - 1387550..1387969 (+) 420 WP_002983376.1 HIT family protein -
  ETT60_RS07145 (ETT60_07135) - 1387966..1388322 (+) 357 WP_129284300.1 chemotaxis protein -
  ETT60_RS07150 (ETT60_07140) - 1388433..1389707 (-) 1275 WP_129284299.1 LCP family protein -
  ETT60_RS07155 (ETT60_07145) - 1389716..1390240 (-) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  ETT60_RS07160 (ETT60_07150) tsaE 1390215..1390676 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40230.46 Da        Isoelectric Point: 10.3713

>NTDB_id=302055 ETT60_RS07130 WP_136038773.1 1385716..1386750(-) (pptB) [Streptococcus pyogenes strain emm77]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERAYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=302055 ETT60_RS07130 WP_136038773.1 1385716..1386750(-) (pptB) [Streptococcus pyogenes strain emm77]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTACTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAGCTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

43.023

100

0.43

  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43