Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   ETT61_RS03545 Genome accession   NZ_CP035438
Coordinates   629897..630493 (+) Length   198 a.a.
NCBI ID   WP_003061588.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 624897..635493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS03525 (ETT61_03515) - 625606..626127 (+) 522 WP_002983930.1 transcription repressor NadR -
  ETT61_RS03530 (ETT61_03520) - 626288..626830 (+) 543 WP_002989140.1 hypothetical protein -
  ETT61_RS03535 (ETT61_03525) - 626954..627724 (+) 771 WP_136020458.1 formate/nitrite transporter family protein -
  ETT61_RS03540 (ETT61_03530) pbp2b 627831..629885 (+) 2055 WP_046166022.1 penicillin-binding protein PBP2B -
  ETT61_RS03545 (ETT61_03535) recR 629897..630493 (+) 597 WP_003061588.1 recombination mediator RecR Machinery gene
  ETT61_RS03550 (ETT61_03540) - 630665..631711 (+) 1047 WP_136020459.1 D-alanine--D-alanine ligase -
  ETT61_RS03555 (ETT61_03545) - 631753..632310 (-) 558 WP_048327435.1 reduced folate ECF transporter S component ThfT -
  ETT61_RS03560 (ETT61_03550) murF 632574..633965 (+) 1392 WP_136020460.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
  ETT61_RS03565 (ETT61_03555) - 634045..634740 (+) 696 WP_136020461.1 TIGR02206 family membrane protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 21599.74 Da        Isoelectric Point: 4.7577

>NTDB_id=301925 ETT61_RS03545 WP_003061588.1 629897..630493(+) (recR) [Streptococcus pyogenes strain emm22.8]
MFYPTPIAKLIESYSKLPGIGVKTATRLAFYTIGMSDEAVNDFAKNLLAAKRELTYCSICGNLTDDDPCSICTDTSRDQT
TILVVEDAKDVSAMEKIQEYHGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL

Nucleotide


Download         Length: 597 bp        

>NTDB_id=301925 ETT61_RS03545 WP_003061588.1 629897..630493(+) (recR) [Streptococcus pyogenes strain emm22.8]
GTGTTTTACCCAACCCCTATTGCAAAATTAATCGAAAGTTATTCCAAGCTCCCAGGAATTGGGGTAAAAACGGCAACTAG
ACTTGCCTTTTACACAATTGGAATGTCTGACGAGGCTGTCAATGACTTTGCTAAAAATTTATTGGCAGCTAAAAGAGAAT
TAACCTATTGTTCCATTTGTGGCAACCTGACAGATGATGATCCTTGTTCTATCTGCACAGATACAAGTCGTGACCAGACA
ACGATTCTTGTGGTGGAAGATGCTAAAGATGTTTCTGCTATGGAAAAAATTCAAGAGTATCATGGTTATTACCATGTGCT
GCATGGTTTAATTTCACCGATGAATGGTGTTGGTCCGGATGATATCAATCTAAAAAGTTTAATTACCCGTTTAATGGACG
GTAAAGTGACTGAAGTTATCGTAGCGACCAATGCCACAGCTGATGGCGAAGCAACATCTATGTATATCTCACGGGTCTTG
AAACCAGCAGGAATCAAAGTTACCCGCTTAGCAAGAGGGCTCGCAGTGGGGTCAGATATTGAATACGCAGATGAAGTCAC
CTTGTTAAGAGCTATTGAAAACCGCACAGAACTTTAA

Domains

Predicted by InterProScan.

Toprim domain (Toprim_4)

(81-171)

RecR protein (RecR_ZnF)

(40-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Streptococcus pneumoniae R6

86.869

100

0.869
  recR Bacillus subtilis subsp. subtilis str. 168

64.141

100

0.641
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

50.256

98.485

0.495