Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT62_RS02210 Genome accession   NZ_CP035437
Coordinates   420591..421625 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain emm78.3     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 415591..426625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT62_RS02180 (ETT62_02180) tsaE 416656..417117 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT62_RS02185 (ETT62_02185) - 417092..417616 (+) 525 WP_063811834.1 GNAT family N-acetyltransferase -
  ETT62_RS02190 (ETT62_02190) - 417625..418908 (+) 1284 WP_032460223.1 LCP family protein -
  ETT62_RS02195 (ETT62_02195) - 419019..419375 (-) 357 WP_014407784.1 hypothetical protein -
  ETT62_RS02200 (ETT62_02200) - 419372..419791 (-) 420 WP_002983376.1 HIT family protein -
  ETT62_RS02205 (ETT62_02205) pptA 419863..420588 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT62_RS02210 (ETT62_02210) pptB 420591..421625 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  ETT62_RS02215 (ETT62_02215) ccrZ 421689..422480 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT62_RS02220 (ETT62_02220) trmB 422480..423115 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT62_RS02230 (ETT62_02230) rimP 423374..423910 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT62_RS02235 (ETT62_02235) nusA 424085..425242 (+) 1158 WP_002983485.1 transcription termination factor NusA -
  ETT62_RS02240 (ETT62_02240) - 425258..425554 (+) 297 WP_002983486.1 YlxR family protein -
  ETT62_RS02245 (ETT62_02245) - 425547..425849 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=301830 ETT62_RS02210 WP_010922583.1 420591..421625(+) (pptB) [Streptococcus pyogenes strain emm78.3]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=301830 ETT62_RS02210 WP_010922583.1 420591..421625(+) (pptB) [Streptococcus pyogenes strain emm78.3]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment