Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   ETT63_RS04575 Genome accession   NZ_CP035436
Coordinates   887479..888549 (+) Length   356 a.a.
NCBI ID   WP_136267182.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm89.14     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 882479..893549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT63_RS04555 (ETT63_04555) - 883489..884187 (+) 699 WP_002989743.1 GntR family transcriptional regulator -
  ETT63_RS04560 (ETT63_04560) - 884285..884617 (+) 333 WP_222571616.1 putative DNA-binding protein -
  ETT63_RS04565 (ETT63_04565) ffh 884632..886194 (+) 1563 WP_136267184.1 signal recognition particle protein -
  ETT63_RS04570 (ETT63_04570) - 886311..887009 (-) 699 WP_002993300.1 S24 family peptidase -
  ETT63_RS04575 (ETT63_04575) xerS 887479..888549 (+) 1071 WP_136267182.1 tyrosine recombinase XerS Machinery gene
  ETT63_RS04580 (ETT63_04580) - 889248..889730 (+) 483 WP_136083509.1 PASTA domain-containing protein -
  ETT63_RS04585 (ETT63_04585) citC 889819..890871 (+) 1053 WP_136267180.1 [citrate (pro-3S)-lyase] ligase -
  ETT63_RS04590 (ETT63_04590) - 890981..892375 (-) 1395 WP_014407594.1 oxaloacetate decarboxylase subunit alpha -
  ETT63_RS04595 (ETT63_04595) citX 892390..892968 (-) 579 WP_010922331.1 citrate lyase holo-[acyl-carrier protein] synthase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41487.63 Da        Isoelectric Point: 9.4834

>NTDB_id=301760 ETT63_RS04575 WP_136267182.1 887479..888549(+) (xerS) [Streptococcus pyogenes strain emm89.14]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYCFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=301760 ETT63_RS04575 WP_136267182.1 887479..888549(+) (xerS) [Streptococcus pyogenes strain emm89.14]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACTGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

Phage integrase family (Phage_integrase)

(177-344)

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(36-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.337

100

0.803

Multiple sequence alignment