Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SPT_RS07805 Genome accession   NC_012469
Coordinates   1493555..1494232 (-) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae Taiwan19F-14     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1488555..1499232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPT_RS07775 (SPT_1566) - 1488717..1489346 (-) 630 WP_000762091.1 NAD(P)-dependent oxidoreductase -
  SPT_RS07780 - 1489584..1489784 (+) 201 WP_001814296.1 hypothetical protein -
  SPT_RS13405 - 1490031..1490212 (+) 182 Protein_1495 hypothetical protein -
  SPT_RS07785 (SPT_1568) - 1490215..1490355 (+) 141 WP_000422775.1 MazG-like protein -
  SPT_RS07790 (SPT_1569) - 1490362..1490538 (+) 177 WP_000166031.1 MazG-like protein -
  SPT_RS07795 (SPT_1570) thrS 1490596..1492539 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  SPT_RS07800 (SPT_1571) - 1492588..1493562 (-) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  SPT_RS07805 (SPT_1572) braR 1493555..1494232 (-) 678 WP_000548959.1 response regulator transcription factor Regulator
  SPT_RS07810 (SPT_1573) - 1494388..1495461 (+) 1074 WP_001273832.1 DUF2974 domain-containing protein -
  SPT_RS07815 (SPT_1574) - 1495552..1495854 (-) 303 WP_000281609.1 hypothetical protein -
  SPT_RS07820 (SPT_1575) - 1495922..1496359 (-) 438 WP_001166785.1 Rrf2 family transcriptional regulator -
  SPT_RS07825 (SPT_1576) - 1496435..1497277 (-) 843 WP_000160938.1 metallophosphoesterase -
  SPT_RS07830 (SPT_1577) - 1497389..1498039 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  SPT_RS13410 (SPT_1578) - 1498020..1498211 (+) 192 WP_001816503.1 hypothetical protein -
  SPT_RS07840 (SPT_1579) - 1498237..1498912 (+) 676 Protein_1507 nicotinamide mononucleotide transporter -
  SPT_RS13470 - 1499014..1499085 (+) 72 Protein_1508 glutamine ABC transporter permease -

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=30153 SPT_RS07805 WP_000548959.1 1493555..1494232(-) (braR) [Streptococcus pneumoniae Taiwan19F-14]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=30153 SPT_RS07805 WP_000548959.1 1493555..1494232(-) (braR) [Streptococcus pneumoniae Taiwan19F-14]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471

  vicR Streptococcus mutans UA159

35.319

100

0.369


Multiple sequence alignment