Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT66_RS02250 Genome accession   NZ_CP035433
Coordinates   428248..429282 (+) Length   344 a.a.
NCBI ID   WP_136286295.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm65     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 423248..434282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT66_RS02220 (ETT66_02220) tsaE 424322..424783 (+) 462 WP_115224942.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ETT66_RS02225 (ETT66_02225) - 424758..425282 (+) 525 WP_115224943.1 GNAT family N-acetyltransferase -
  ETT66_RS02230 (ETT66_02230) - 425291..426565 (+) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT66_RS02235 (ETT66_02235) - 426676..427032 (-) 357 WP_002988657.1 hypothetical protein -
  ETT66_RS02240 (ETT66_02240) - 427029..427448 (-) 420 WP_002983376.1 HIT family protein -
  ETT66_RS02245 (ETT66_02245) pptA 427520..428245 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT66_RS02250 (ETT66_02250) pptB 428248..429282 (+) 1035 WP_136286295.1 ABC transporter permease Regulator
  ETT66_RS02255 (ETT66_02255) ccrZ 429346..430137 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT66_RS02260 (ETT66_02260) trmB 430137..430772 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT66_RS02270 (ETT66_02270) rimP 431031..431567 (+) 537 WP_174147175.1 ribosome maturation factor RimP -
  ETT66_RS02275 (ETT66_02275) nusA 431742..432899 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT66_RS02280 (ETT66_02280) rnpM 432915..433211 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT66_RS02285 (ETT66_02285) - 433204..433506 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40228.43 Da        Isoelectric Point: 10.3713

>NTDB_id=301456 ETT66_RS02250 WP_136286295.1 428248..429282(+) (pptB) [Streptococcus pyogenes strain emm65]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSVGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=301456 ETT66_RS02250 WP_136286295.1 428248..429282(+) (pptB) [Streptococcus pyogenes strain emm65]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTGTGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427