Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   C4Q21_RS08490 Genome accession   NZ_CP030777
Coordinates   1773265..1775076 (+) Length   603 a.a.
NCBI ID   WP_015537848.1    Uniprot ID   A0A3E2UUZ5
Organism   Faecalibacterium prausnitzii strain APC918/95b     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1768265..1780076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4Q21_RS08470 (C4Q21_08470) - 1768551..1769207 (-) 657 WP_097785909.1 sortase -
  C4Q21_RS08475 (C4Q21_08475) - 1769270..1770250 (-) 981 WP_223451334.1 Na/Pi symporter -
  C4Q21_RS08480 (C4Q21_08480) - 1770473..1770982 (+) 510 WP_223451332.1 MarR family transcriptional regulator -
  C4Q21_RS08485 (C4Q21_08485) - 1770966..1773263 (+) 2298 WP_015537849.1 ABC transporter ATP-binding protein -
  C4Q21_RS08490 (C4Q21_08490) rcrQ 1773265..1775076 (+) 1812 WP_015537848.1 ABC transporter ATP-binding protein Regulator
  C4Q21_RS08495 (C4Q21_08495) - 1775245..1776171 (-) 927 WP_015537847.1 LysR family transcriptional regulator -
  C4Q21_RS08500 (C4Q21_08500) - 1776345..1778378 (+) 2034 WP_015537846.1 FAD-binding protein -
  C4Q21_RS08505 (C4Q21_08505) - 1778581..1779501 (+) 921 WP_113621161.1 MoxR family ATPase -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 66712.00 Da        Isoelectric Point: 6.7074

>NTDB_id=301409 C4Q21_RS08490 WP_015537848.1 1773265..1775076(+) (rcrQ) [Faecalibacterium prausnitzii strain APC918/95b]
MPRPGRPTTERAKNFKGTLRQLIRTMSHYKLPLAAAMLFAVLSTIFNIAGPKVLAKATTALATGWIARLRGTGSIDFVYI
GRILLFLLGMYLLSSAFSFIQGWLMTGLSQKVCYDFRRQISEKINRLPLAYFEKRTVGEVLSRITNDVDTLGQSLNQSIT
QLITSVTTMIGVLVMMFSISPRMTLIALLILPVSLALVLVVVKFSQKYFKAQQATLGVVNGQVEEIYAGHNVVKAFNREA
VVLADFNAANDKLYESAWKSQFLSGLMMPIMNFVGNLGYVAVAIVGSIFAANGVITIGDIQAFIQYVKNFTQPIQQLSQV
SNMLQSMAAAAERVFEFLNEPEEAQLADPARRADPADIDGQVTFDHVRFGYTPDKTVIHDFSCTVQPGQKVAIVGPTGAG
KTTMVKLLMRFYDVDAGSITLNGHNVRDFDRSALREGFGMVLQDTWLFKGTIMENIRYGRLDATDEEVIAAAKAANADHF
IRTLPGGYQMELNEDASNVSQGQKQLLTIARTILADNRILILDEATSSVDTRTEQRIQTAMDRLMEGRTSFVIAHRLSTI
RDADLILVMRDGDIVEQGTHDQLIEAGGFYADLYNSQFEDVVD

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=301409 C4Q21_RS08490 WP_015537848.1 1773265..1775076(+) (rcrQ) [Faecalibacterium prausnitzii strain APC918/95b]
ATGCCCAGACCCGGACGTCCCACCACTGAGCGCGCCAAGAACTTTAAAGGCACGCTGCGGCAGCTCATCCGCACTATGAG
CCACTACAAGCTGCCCCTTGCGGCAGCCATGCTGTTTGCTGTTCTGTCCACCATCTTCAACATTGCAGGCCCCAAGGTGC
TGGCAAAAGCCACCACCGCCCTTGCCACCGGCTGGATCGCCCGGCTGCGCGGCACCGGCAGCATCGATTTTGTGTATATC
GGCCGCATTCTGCTGTTTTTGCTGGGAATGTACCTGCTGAGCAGCGCCTTCAGCTTTATTCAGGGCTGGCTGATGACCGG
CCTTTCCCAGAAGGTCTGCTACGACTTCCGCCGCCAGATCAGTGAAAAGATCAACCGCCTGCCGCTGGCGTACTTTGAAA
AGCGCACCGTGGGCGAGGTGCTCTCCCGCATCACCAACGATGTGGACACACTGGGCCAGAGCTTGAACCAGAGCATCACC
CAGCTGATCACCAGCGTGACCACCATGATCGGTGTGCTGGTGATGATGTTTTCCATCAGCCCCCGCATGACCCTGATTGC
CCTGCTGATCTTACCGGTATCGCTGGCGCTGGTGCTGGTGGTGGTCAAGTTCAGCCAGAAGTACTTCAAGGCACAGCAGG
CTACGCTGGGCGTGGTCAACGGTCAGGTCGAGGAGATCTACGCCGGCCACAATGTGGTCAAGGCGTTTAACCGCGAAGCC
GTGGTACTGGCAGACTTCAACGCCGCCAACGATAAGCTGTACGAATCCGCATGGAAAAGCCAGTTCCTCTCGGGCCTTAT
GATGCCCATCATGAACTTTGTGGGCAACTTGGGCTATGTGGCAGTGGCCATCGTGGGCAGCATTTTTGCTGCAAACGGTG
TTATCACCATTGGTGATATTCAGGCTTTTATCCAGTATGTCAAAAACTTTACCCAGCCCATCCAGCAGCTTTCGCAGGTG
TCCAATATGCTGCAAAGCATGGCTGCTGCTGCCGAGCGCGTGTTCGAGTTTTTGAACGAGCCGGAGGAGGCGCAGTTGGC
CGACCCTGCCCGCCGCGCCGACCCCGCCGACATTGACGGACAGGTCACCTTTGACCATGTGCGCTTCGGCTACACCCCGG
ACAAGACCGTCATCCACGACTTCAGCTGCACGGTGCAGCCCGGCCAGAAGGTAGCCATCGTGGGTCCCACCGGTGCGGGC
AAGACCACCATGGTCAAGCTGCTGATGCGCTTTTACGATGTGGACGCCGGTTCTATCACCCTGAACGGCCACAATGTGCG
GGACTTTGACCGCAGCGCCTTGCGCGAAGGCTTTGGCATGGTGCTGCAGGACACATGGCTGTTTAAGGGCACCATCATGG
AGAACATCCGCTACGGCCGGCTGGACGCCACCGATGAAGAGGTGATTGCTGCCGCAAAGGCTGCCAACGCCGACCACTTT
ATCCGCACCCTGCCCGGCGGCTACCAGATGGAGCTGAACGAGGACGCCTCCAACGTCAGTCAGGGACAAAAGCAGCTGCT
CACCATCGCCCGCACCATTCTGGCAGATAACCGCATCCTGATTTTGGACGAGGCTACCAGCAGCGTGGATACCCGCACCG
AGCAGCGCATCCAGACCGCCATGGACCGCCTAATGGAGGGGCGCACCAGCTTTGTCATCGCCCACCGCCTTTCCACCATC
CGGGATGCCGACCTCATCCTTGTGATGCGGGACGGCGACATTGTGGAGCAGGGCACCCACGACCAGCTGATCGAGGCAGG
CGGCTTCTACGCTGACCTGTACAACAGCCAGTTTGAGGACGTGGTGGATTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(34-313)

ABC transporter (ABC_tran)

(379-527)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3E2UUZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.68

97.512

0.494

Multiple sequence alignment