Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   DPR03_RS03385 Genome accession   NZ_CP030754
Coordinates   701993..706492 (+) Length   1499 a.a.
NCBI ID   WP_071321159.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain H3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 696993..711492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DPR03_RS03360 - 697418..698077 (-) 660 WP_071321157.1 hypothetical protein -
  DPR03_RS03365 pilG 698385..698768 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  DPR03_RS03370 - 698799..699167 (+) 369 WP_004814764.1 response regulator -
  DPR03_RS03375 - 699173..699709 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  DPR03_RS03380 - 699755..701824 (+) 2070 WP_071321158.1 methyl-accepting chemotaxis protein -
  DPR03_RS03385 chpA 701993..706492 (+) 4500 WP_071321159.1 Hpt domain-containing protein Regulator
  DPR03_RS03390 - 706496..706957 (+) 462 WP_008307514.1 hypothetical protein -
  DPR03_RS03395 dapE 707031..708167 (-) 1137 WP_071321160.1 succinyl-diaminopimelate desuccinylase -
  DPR03_RS03400 - 708292..708441 (-) 150 WP_004814773.1 entericidin A/B family lipoprotein -
  DPR03_RS03405 - 708580..709428 (-) 849 WP_071321161.1 DUF1853 family protein -
  DPR03_RS03410 - 709517..709912 (+) 396 WP_071321162.1 YbaN family protein -
  DPR03_RS03415 elsL 709917..710423 (+) 507 WP_071321163.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1499 a.a.        Molecular weight: 167000.73 Da        Isoelectric Point: 4.2285

>NTDB_id=301322 DPR03_RS03385 WP_071321159.1 701993..706492(+) (chpA) [Acinetobacter schindleri strain H3]
MKEILKDLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELNTLLPQWFATPDHQETLTTIRRHFHTLKGSGRMVGAKQA
GEIAWAVEDTLNRVLSGSIKLTPVIQKFAQATLNIYQYILYPCFKQVQPLTIDLRPVVLLGQQLQQQLSPEPALEELLLL
ADNLTAEGQLTGLELADTAEADSSIAEIAETATAERVEVAEERTDLEETVAIFVEEAEEHLATIHDFLKHENSAKQDYNG
LIRALHTLRGSSSMAQIDDICEASVKVENLFKTLVQDEIASTSKETALLQQYSEFIGDYLHLLKQGNTEKLAGISATFED
AWDTYGFTVTEQQDADQSQGMVTRLVELNIDQLLDAEFEFDKRVLEEYPDYIEALSQQAAELMVHTDNRASIGIHEFASQ
LKAAYDALLARPVLLESDYAFELFAQAHQEFIHLFDTLAAGQRVILNAEVEKLLADLSAFVQQDIEVFATDKVVETEVPA
PVESDISTAVDFTGLSQRIVADRQQQDAEDANRDFDEDLLDIFLEEADELLAGIDEDLNTWSKEPENTHSLNNLMRYLHT
LKGGANMIAATHIGSIAHELESIYERVIRQQITVTPALIQIIRLVQDNVSDRIQSIRDDKIDYPAPEAIHMLQNIQALVA
GTATATPVAAVETVEAETSVELEVIDDASESAEIVVESQALERVDGFETESVPASDEQIQEDQSGETLTAESAESMLADE
DDLQSIVEETFLEESQEILENAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMISNESIASIAYGLESAFEQFAVHHF
NSNAYDSLLQKTLKWLGQAIFDHDYNGFEQIKAALDAIEFVDVTAQLPERLTKTESLEVTTGFEFVQGDGTEPPNMMGEW
AENTSSDSSNEMIRISAELVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSE
NSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQ
RIVRQTSTTLNRPAELIVQNTEGELDRTILERLVNPFEHMLRNAIDHGLEDTAERLALNKPEVGSIVLNISRQGTDVIIS
FSDDGKGIDAESIRAKAISLDLIKAEQQVDQEELLQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKTLGGHVSVNSELG
KGTTFTIRVPTTVAVSDALMVKAGDQQFAISLAQIDRIVRIAPATLETYFNSKDDYFKIDGVNYKLRYLSEFVSNQPIPR
LNNVAHSLPVLLIKGNGGQSIALLVDQLVGSRAQIVVKPIGQQFASVGVIAGATILGDGQVCLILDGQNIARQVQATQRI
KQLSDQQDLSRRGNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTN
LVRHHDIHRNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANVQELIAAQQG

Nucleotide


Download         Length: 4500 bp        

>NTDB_id=301322 DPR03_RS03385 WP_071321159.1 701993..706492(+) (chpA) [Acinetobacter schindleri strain H3]
ATGAAAGAAATATTAAAAGATCTAGTTGAAACAACAGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCTGAAATTTT
AGAGATATTTGTCGAAGAGATTGAAGAAATCTTTGTCGAGTTAAATACTTTATTGCCACAGTGGTTTGCCACACCAGATC
ATCAAGAAACATTAACCACCATTCGCCGCCATTTCCATACGCTGAAAGGTTCGGGTCGTATGGTCGGTGCGAAGCAGGCG
GGTGAAATTGCCTGGGCAGTTGAAGATACTTTGAACCGTGTACTTTCAGGTTCAATCAAATTAACACCAGTCATTCAGAA
GTTTGCGCAAGCAACTTTAAATATCTATCAATATATATTGTATCCATGCTTTAAGCAGGTACAGCCATTAACCATTGATT
TACGTCCAGTCGTACTTTTAGGACAACAATTACAACAGCAATTGAGTCCAGAACCGGCACTTGAAGAATTATTGCTACTT
GCGGACAATCTGACTGCTGAAGGTCAGCTAACAGGTCTTGAACTTGCGGATACTGCAGAAGCAGATTCATCAATAGCAGA
GATTGCTGAAACTGCTACCGCAGAACGAGTAGAAGTTGCTGAAGAACGTACTGACCTTGAAGAAACGGTAGCGATCTTTG
TTGAAGAAGCCGAGGAACATCTGGCGACAATCCATGATTTCCTGAAACACGAAAATAGTGCCAAGCAAGACTATAATGGC
CTGATTCGTGCATTGCATACCCTGCGTGGCAGCTCTTCTATGGCACAGATTGATGATATCTGTGAGGCCAGCGTTAAAGT
AGAGAATTTATTTAAAACGCTGGTTCAGGATGAAATTGCTTCAACTTCCAAAGAAACAGCACTATTACAGCAATATTCAG
AATTTATCGGTGATTATTTACATCTATTGAAACAGGGTAACACTGAAAAGCTGGCAGGGATTTCTGCTACTTTTGAGGAT
GCCTGGGATACCTATGGCTTTACTGTGACTGAACAGCAGGATGCTGATCAATCTCAAGGTATGGTTACACGTCTGGTTGA
ACTGAATATTGATCAGTTACTGGATGCCGAATTTGAGTTTGATAAGCGGGTACTTGAAGAATATCCAGATTATATTGAAG
CTTTAAGCCAGCAAGCCGCAGAGCTGATGGTACATACGGATAACCGTGCATCGATCGGTATTCATGAATTCGCATCCCAG
TTAAAAGCAGCTTATGATGCTTTGCTGGCGAGACCGGTCTTGCTTGAAAGTGATTATGCCTTTGAACTTTTTGCACAGGC
ACACCAGGAATTTATTCACCTGTTCGATACGCTCGCGGCAGGACAGCGGGTGATTTTGAATGCCGAAGTTGAAAAACTTC
TGGCGGATCTGTCTGCCTTTGTACAGCAAGACATCGAAGTATTCGCTACAGACAAAGTTGTTGAAACTGAGGTACCTGCG
CCAGTAGAGTCAGATATATCCACAGCAGTTGATTTTACTGGGCTCAGCCAGCGTATTGTAGCTGATCGTCAGCAGCAGGA
CGCTGAAGATGCGAACCGTGATTTCGATGAAGACTTGCTGGATATCTTCCTGGAAGAAGCAGATGAGTTGCTGGCAGGCA
TTGATGAAGACCTGAATACCTGGTCCAAAGAACCTGAAAATACCCACTCATTGAACAATCTGATGCGTTATTTGCATACC
CTGAAGGGGGGTGCAAACATGATTGCTGCCACGCATATCGGTTCGATTGCACATGAGCTGGAAAGTATTTATGAGCGCGT
GATCCGTCAGCAGATTACCGTAACACCTGCATTGATCCAGATTATCCGCCTGGTACAGGATAACGTGTCAGACCGTATCC
AGAGTATTCGTGATGATAAGATTGATTATCCGGCACCTGAAGCTATTCATATGCTGCAAAATATCCAGGCACTTGTGGCT
GGAACAGCTACTGCAACTCCGGTAGCTGCTGTTGAGACGGTAGAAGCAGAGACTTCTGTAGAACTAGAAGTTATTGACGA
TGCATCGGAATCTGCTGAGATCGTTGTGGAATCACAAGCGCTTGAGCGAGTAGACGGCTTTGAAACTGAATCTGTTCCTG
CATCAGATGAGCAAATTCAGGAAGATCAGTCAGGCGAAACACTTACTGCTGAGTCAGCTGAATCTATGCTTGCTGATGAA
GATGATCTACAATCGATTGTTGAAGAAACCTTCCTGGAAGAATCGCAAGAGATTCTGGAAAATGCAGAAAAATTACTGAA
CCAATGGTTCGATCAGCGAAGTGACCGTAGCTTATTGCTGCAACTTCAGCGTGCTGCCCACAGTATCAAGGGTGGCGCCC
GCATGATCAGCAATGAAAGCATCGCAAGTATTGCTTATGGTCTGGAAAGTGCATTTGAACAGTTTGCTGTTCATCATTTT
AACTCCAATGCCTATGACAGTCTGCTGCAAAAGACCCTGAAATGGCTGGGTCAAGCCATTTTTGATCATGATTACAATGG
TTTTGAGCAAATCAAAGCAGCGCTGGATGCGATTGAGTTTGTAGATGTCACTGCACAGCTACCTGAACGTCTGACCAAAA
CTGAAAGTCTGGAAGTTACAACTGGCTTCGAGTTTGTTCAGGGTGATGGTACTGAACCACCAAATATGATGGGTGAGTGG
GCTGAGAACACCTCAAGCGATAGCAGTAACGAGATGATCCGTATTTCAGCCGAACTGGTCGAGAAGATGATTGACCTGTC
AGGCGAAAATGCAATTAACCGTTCGCGTATCGAGATGGATCTGGGACAGCTCGGCAATACCTTAAATGAGATGGAACTGG
CGATCAAACGTCTGGCTGATCAGCTGCGCCGTATGGAAGGCGAGCTGGAGTCTCAGATTATTGCCAAACATGGCTCAGAA
AACTCACGCTATGCTGACTTCGACCCCTTGGAGATGGACCAATATTCATCCCTAAACCAGTTATCTAAATCTCTTGCTGA
ATCTGCATCGGACTTGGTCGACTTTAAGACCACGCTCGCGGAAAAAATCCGTGATACCGAAGGTTTGCTATTGCAACAGT
CGCGTATCCAGGCTGAGATTCAGGAAAGTCTGATGCGTACCCGTCTGGTACCATTTGACCGTATGTTGCCACGTTTACAA
CGTATTGTGCGTCAAACTTCGACTACACTGAACCGTCCGGCAGAGCTGATTGTTCAGAATACTGAAGGTGAACTCGACCG
TACCATTCTGGAACGTCTGGTAAACCCATTTGAGCACATGCTACGTAACGCGATTGACCATGGTCTGGAAGATACTGCAG
AACGGCTTGCGCTGAATAAGCCAGAAGTCGGTTCAATTGTCCTGAACATTAGCCGTCAGGGTACCGATGTCATTATCTCC
TTTAGTGATGATGGTAAGGGAATTGATGCGGAGAGTATTCGTGCTAAAGCCATCAGTCTGGACTTGATCAAAGCGGAACA
GCAGGTGGATCAGGAAGAATTGCTGCAATTCATCTTCCATCCAGGTTTCAGTACGGCTAAAGCAGTCACCCAGATTTCGG
GTCGAGGTGTTGGTCTGGACGTGGTACAAAGCGAAATCAAAACGCTGGGCGGTCACGTTTCGGTAAATTCTGAACTGGGC
AAAGGCACGACCTTTACGATTCGCGTACCGACCACTGTGGCCGTCAGTGATGCCTTAATGGTGAAAGCGGGTGACCAGCA
ATTTGCCATTTCTCTGGCACAGATTGACCGTATTGTCCGTATTGCACCAGCAACACTGGAAACTTACTTCAACAGTAAGG
ATGATTACTTCAAGATTGATGGTGTGAACTACAAGCTGCGCTATCTGTCTGAGTTTGTCTCTAATCAGCCAATTCCACGT
TTGAACAATGTTGCGCATTCATTACCAGTACTCCTTATCAAGGGTAATGGTGGTCAAAGTATCGCTTTGCTGGTGGATCA
ATTAGTTGGCTCACGTGCACAGATCGTAGTGAAACCGATTGGACAGCAGTTTGCCAGTGTGGGTGTGATTGCAGGGGCAA
CCATTCTTGGTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGGTTCAGGCGACTCAGCGTATC
AAACAGTTATCTGATCAGCAGGATCTGTCGCGTCGTGGTAATGCACGTCGTCTGGTCATGATTGTCGATGACTCGGTAAC
TGTACGTAAGGTAACGTCACGTCTGTTAGAGCGTCAGGGTTATGATATTGTCACTGCCAAAGATGGTGTCGACGCGATTG
AACAGTTGGAAAATGTCCGTCCAGACCTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACTAAC
CTGGTTCGCCATCATGATATTCACCGCAACTTGCCAATTATCATGATCACCTCACGTACTGGGGAGAAGCATCGTGAGCG
TGCCTTCAGTCTGGGTGTAACACACTATATGGGTAAACCGTTCCAGGAAGCGGAGCTGCTTGCCAATGTTCAAGAATTAA
TTGCTGCTCAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.719

100

0.62


Multiple sequence alignment