Detailed information NTG0301306

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: DPR03_RS00995
• Genome accession: NZ_CP030754
• Coordinates: 207702..209120 (-)
• Length: 472 a.a.
• NCBI ID: WP_004810143.1
• Uniprot ID: N9N911
• Organism: Acinetobacter schindleri strain H3
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 202702..214120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DPR03_RS00980	lptG	203737..204807 (+)	1071	WP_004810149.1	LPS export ABC transporter permease LptG	-
DPR03_RS00985	gpmI	204932..206482 (+)	1551	WP_071319758.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
DPR03_RS00990	-	206503..207675 (+)	1173	WP_004810144.1	S41 family peptidase	-
DPR03_RS00995	pilR	207702..209120 (-)	1419	WP_004810143.1	sigma-54-dependent transcriptional regulator	Regulator
DPR03_RS01000	pilS	209144..210709 (-)	1566	WP_071319759.1	two-component system sensor histidine kinase NtrB	Regulator
DPR03_RS01005	-	210759..211394 (-)	636	WP_004810139.1	response regulator	-
DPR03_RS01010	-	211618..212673 (+)	1056	WP_026056747.1	serine hydrolase	-
DPR03_RS01015	thrC	212738..213877 (-)	1140	WP_071319760.1	threonine synthase	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 53538.51 Da
• Isoelectric Point: 6.0929

>NTDB_id=301306 DPR03_RS00995 WP_004810143.1 207702..209120(-) (pilR) [Acinetobacter schindleri strain H3]
MEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKKRLADHQYDACLTDLNLPDGNGLQLLEFISEHHPSLPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYQSNQQDTLEYKMLIGQSKPIQQLRTTLHKIARSQ
APVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPAELMESELFGHKKGSFTGAMQDKQGLIQSAHGGSLFLDEI
AELPLSMQVKLLRAVQEKRIRPLGSDIEIDVDFRVISASHQDLEAQVQQGKFRQDLFFRIHVMDLVLPPLRERGNDILLL
AEHFIQKICQEWQIPVKRLTEHSKEQLLTQYYPGNVRELRNIIERAITLSDEDTIDIQHLQTAPLRQSFVTSEITSNIAS
ESSNTTDTFIVPKKLPEEGLELYMEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDEEE

Nucleotide

• Length: 1419 bp

>NTDB_id=301306 DPR03_RS00995 WP_004810143.1 207702..209120(-) (pilR) [Acinetobacter schindleri strain H3]
GTGGAACAACAACCACTGGTACTATTGGTCGATGATGAAGAAGATCTCTGTACGCTCATGCAGATGTCGCTCATGCGTAT
GGGAATTCGCACGCATATCGCCCATCGTCTGGAGGATGCTAAAAAACGCCTGGCAGATCATCAGTATGATGCCTGCCTTA
CGGACTTGAATCTGCCTGATGGTAATGGCTTGCAGCTACTGGAATTTATCAGTGAGCATCATCCTTCCCTACCGGTTGCT
GTGTTAACTGCCTATGGCAATATGGATATTGCCATTGCTGCACTCAAGGCAGGTGCCTTTGACTTTGTCAGTAAGCCGAT
CAATCAGAAACATCTGGAGCAGTTACTGCAAAAGGCACTAAATAAGCCAGTAGATTACCAATCCAATCAGCAAGATACCC
TAGAATATAAAATGCTGATTGGCCAGTCCAAGCCGATTCAGCAATTACGTACGACTTTGCATAAAATTGCCCGCTCTCAA
GCCCCGGTATTTATTACCGGTGAATCTGGTACAGGTAAAGAAGTTGTAGCAAATCTGGTTCATCGCCTCAGTAACCGGAG
TGAAGGACCCTTTATTGCCATTAACTGTGGCGCAATTCCAGCTGAACTGATGGAAAGTGAGCTATTCGGGCACAAGAAAG
GCAGCTTTACTGGCGCCATGCAGGACAAACAGGGCCTAATCCAGTCTGCACATGGCGGCAGTTTATTTCTGGATGAAATT
GCAGAACTTCCACTCAGTATGCAGGTCAAACTGCTACGTGCAGTACAGGAAAAACGGATTCGCCCTTTAGGCTCAGATAT
CGAAATTGATGTGGATTTTCGCGTCATCAGCGCCAGTCATCAGGACCTGGAAGCACAGGTACAGCAAGGTAAATTTCGTC
AGGATTTATTCTTCCGCATTCATGTGATGGATCTAGTGTTGCCACCATTACGTGAGCGTGGTAATGACATTCTGCTGCTG
GCTGAACACTTTATTCAGAAGATCTGTCAGGAATGGCAAATCCCTGTGAAACGCCTGACTGAACATAGCAAAGAGCAGTT
ACTGACTCAATACTATCCAGGAAATGTCCGGGAATTGCGTAATATCATCGAGCGAGCTATTACCCTCAGCGATGAAGACA
CAATTGATATCCAGCATTTGCAAACTGCACCTTTACGCCAGAGTTTTGTGACCTCCGAAATCACATCGAATATAGCATCC
GAATCGAGTAACACTACTGACACTTTTATCGTACCGAAAAAACTGCCTGAAGAAGGTCTTGAACTGTATATGGAGAAAAT
CGAGAAAGAAATTTTGCTAAATGCATTGAATCTGACTCACTGGAACCGTACGCTTGCCGCAAAAAAGTTGGGCATGTCTT
TCCGCTCGCTGCGTTATCGTCTGAAGAAATTTGGGCTCGATACCGATGAAGAAGAATGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (139-305)

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

3D structure

• AlphaFold DB: N9N911

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.895	100	0.752
pilR	Pseudomonas aeruginosa PAK	48.188	99.364	0.479