Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   ETT70_RS07155 Genome accession   NZ_CP035429
Coordinates   1369174..1370208 (-) Length   344 a.a.
NCBI ID   WP_136275919.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364174..1375208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS07120 (ETT70_07110) - 1364950..1365252 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT70_RS07125 (ETT70_07115) rnpM 1365245..1365541 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT70_RS07130 (ETT70_07120) nusA 1365557..1366714 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  ETT70_RS07135 (ETT70_07125) rimP 1366889..1367425 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT70_RS07145 (ETT70_07135) trmB 1367684..1368319 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT70_RS07150 (ETT70_07140) ccrZ 1368319..1369110 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT70_RS07155 (ETT70_07145) pptB 1369174..1370208 (-) 1035 WP_136275919.1 ABC transporter permease Regulator
  ETT70_RS07160 (ETT70_07150) pptA 1370211..1370936 (-) 726 WP_136275920.1 ABC transporter ATP-binding protein Regulator
  ETT70_RS07165 (ETT70_07155) - 1371008..1371427 (+) 420 WP_002983376.1 HIT family protein -
  ETT70_RS07170 (ETT70_07160) - 1371424..1371780 (+) 357 WP_136117622.1 chemotaxis protein -
  ETT70_RS07175 (ETT70_07165) - 1371891..1373165 (-) 1275 WP_136105533.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT70_RS07180 (ETT70_07170) - 1373174..1373698 (-) 525 WP_111704937.1 GNAT family N-acetyltransferase -
  ETT70_RS07185 (ETT70_07175) tsaE 1373673..1374134 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40256.48 Da        Isoelectric Point: 10.3713

>NTDB_id=301116 ETT70_RS07155 WP_136275919.1 1369174..1370208(-) (pptB) [Streptococcus pyogenes strain emmNA]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIIGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=301116 ETT70_RS07155 WP_136275919.1 1369174..1370208(-) (pptB) [Streptococcus pyogenes strain emmNA]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTATAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427