Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT71_RS07145 Genome accession   NZ_CP035428
Coordinates   1400074..1401108 (-) Length   344 a.a.
NCBI ID   WP_020837588.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1395074..1406108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS07110 (ETT71_07105) - 1395850..1396152 (-) 303 WP_011285079.1 YlxQ-related RNA-binding protein -
  ETT71_RS07115 (ETT71_07110) rnpM 1396145..1396441 (-) 297 WP_136075340.1 RNase P modulator RnpM -
  ETT71_RS07120 (ETT71_07115) nusA 1396457..1397614 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  ETT71_RS07125 (ETT71_07120) rimP 1397789..1398325 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT71_RS07135 (ETT71_07130) trmB 1398584..1399219 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT71_RS07140 (ETT71_07135) ccrZ 1399219..1400010 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT71_RS07145 (ETT71_07140) pptB 1400074..1401108 (-) 1035 WP_020837588.1 ABC transporter permease Regulator
  ETT71_RS07150 (ETT71_07145) pptA 1401111..1401836 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT71_RS07155 (ETT71_07150) - 1401908..1402327 (+) 420 WP_002983376.1 HIT family protein -
  ETT71_RS07160 (ETT71_07155) - 1402324..1402680 (+) 357 WP_002988657.1 hypothetical protein -
  ETT71_RS07165 (ETT71_07160) - 1402791..1404065 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT71_RS07170 (ETT71_07165) - 1404074..1404598 (-) 525 WP_111676182.1 GNAT family N-acetyltransferase -
  ETT71_RS07175 (ETT71_07170) tsaE 1404573..1405034 (-) 462 WP_136093556.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40260.49 Da        Isoelectric Point: 10.3713

>NTDB_id=301020 ETT71_RS07145 WP_020837588.1 1400074..1401108(-) (pptB) [Streptococcus pyogenes strain emmSTG866.1]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFVLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=301020 ETT71_RS07145 WP_020837588.1 1400074..1401108(-) (pptB) [Streptococcus pyogenes strain emmSTG866.1]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTACAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTGTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment