Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   SPT_RS01065 Genome accession   NC_012469
Coordinates   186145..186585 (-) Length   146 a.a.
NCBI ID   WP_000861967.1    Uniprot ID   -
Organism   Streptococcus pneumoniae Taiwan19F-14     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 181145..191585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPT_RS01045 (SPT_0205) nrdI 181647..182117 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  SPT_RS01050 (SPT_0206) - 182423..183769 (-) 1347 WP_012677168.1 IS1380-like element ISSpn5 family transposase -
  SPT_RS01055 (SPT_0207) - 184118..185380 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  SPT_RS01060 (SPT_0208) - 185690..186148 (-) 459 WP_000745055.1 DUF3021 domain-containing protein -
  SPT_RS01065 (SPT_0209) brsR 186145..186585 (-) 441 WP_000861967.1 LytTR family DNA-binding domain-containing protein Regulator
  SPT_RS13220 (SPT_0210) - 186673..186798 (-) 126 WP_001822433.1 hypothetical protein -
  SPT_RS01070 (SPT_0211) hexB 186941..188890 (+) 1950 WP_000018164.1 DNA mismatch repair endonuclease MutL Machinery gene
  SPT_RS01075 (SPT_0212) ribE 189215..189682 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  SPT_RS01080 (SPT_0213) - 189683..190888 (-) 1206 WP_001814751.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  SPT_RS01085 (SPT_0214) ribE 190908..191543 (-) 636 WP_000493846.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17151.84 Da        Isoelectric Point: 5.9797

>NTDB_id=30097 SPT_RS01065 WP_000861967.1 186145..186585(-) (brsR) [Streptococcus pneumoniae Taiwan19F-14]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLIEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=30097 SPT_RS01065 WP_000861967.1 186145..186585(-) (brsR) [Streptococcus pneumoniae Taiwan19F-14]
ATGAAAGTAGAATTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
TCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGATAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.735

100

0.37

Multiple sequence alignment