Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT73_RS06970 Genome accession   NZ_CP035426
Coordinates   1355378..1356412 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm57     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1350378..1361412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT73_RS06935 (ETT73_06930) - 1351154..1351456 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  ETT73_RS06940 (ETT73_06935) rnpM 1351449..1351745 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  ETT73_RS06945 (ETT73_06940) nusA 1351761..1352918 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT73_RS06950 (ETT73_06945) rimP 1353093..1353629 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT73_RS06960 (ETT73_06955) trmB 1353888..1354523 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT73_RS06965 (ETT73_06960) ccrZ 1354523..1355314 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT73_RS06970 (ETT73_06965) pptB 1355378..1356412 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  ETT73_RS06975 (ETT73_06970) pptA 1356415..1357140 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  ETT73_RS06980 (ETT73_06975) - 1357212..1357631 (+) 420 WP_002983376.1 HIT family protein -
  ETT73_RS06985 (ETT73_06980) - 1357628..1357984 (+) 357 WP_002988657.1 hypothetical protein -
  ETT73_RS06990 (ETT73_06985) - 1358095..1359378 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  ETT73_RS06995 (ETT73_06990) - 1359387..1359911 (-) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  ETT73_RS07000 (ETT73_06995) tsaE 1359886..1360347 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=300830 ETT73_RS06970 WP_002994331.1 1355378..1356412(-) (pptB) [Streptococcus pyogenes strain emm57]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=300830 ETT73_RS06970 WP_002994331.1 1355378..1356412(-) (pptB) [Streptococcus pyogenes strain emm57]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTTTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATTCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment