Detailed information NTG0300536

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: DQQ01_RS11490
• Genome accession: NZ_CP030280
• Coordinates: 2362547..2363929 (-)
• Length: 460 a.a.
• NCBI ID: WP_111920156.1
• Uniprot ID: -
• Organism: Blautia argi strain KCTC 15426
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2357547..2368929

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQQ01_RS11485 (DQQ01_11480)	-	2361295..2362533 (-)	1239	WP_242980355.1	MFS transporter	-
DQQ01_RS11490 (DQQ01_11485)	radA	2362547..2363929 (-)	1383	WP_111920156.1	DNA repair protein RadA	Machinery gene
DQQ01_RS11495 (DQQ01_11490)	-	2364038..2364451 (-)	414	WP_111920157.1	endosialidase	-
DQQ01_RS11500 (DQQ01_11495)	-	2364523..2366982 (-)	2460	WP_111920158.1	ATP-dependent Clp protease ATP-binding subunit	-
DQQ01_RS11505 (DQQ01_11500)	-	2367008..2367373 (-)	366	Protein_2292	GntR family transcriptional regulator	-
DQQ01_RS11510 (DQQ01_11505)	-	2367441..2368791 (-)	1351	Protein_2293	MATE family efflux transporter	-

Sequence

Protein

• Length: 460 a.a.
• Molecular weight: 50065.82 Da
• Isoelectric Point: 8.0235

>NTDB_id=300536 DQQ01_RS11490 WP_111920156.1 2362547..2363929(-) (radA) [Blautia argi strain KCTC 15426]
MAKAKKSVFFCQNCGYESSKWLGQCPGCREWNSFVEETVSAGGKAAPAKGISGSEGRTGKKNEPVRLAEIQVREADRVST
NMEELDRVLGGGIVPGSMVLVGGDPGIGKSTLLLQVCRQLTIQGHKVLYISGEESLRQIKLRAKRIGEFNEHLYLLCETN
LEIIRSTIERLKPEMVVIDSIQTMYNEEVSSAPGSVSQVRESTGILMQIAKGLGISVFIVGHVTKDGSVAGPRVLEHMVD
TVLYFEGDRQLAYRILRGVKNRFGSTNEIGVFEMREKGLEEVKNPSQALLNGRPTDASGTTVVCSVEGTRPILIEIQALV
TRTNFGLPRRTSVGIDYNRVNLLMAVLEKRAGIRLGDCDAYVNLAGGMKLGEPAIDLGIVLSLVSSYKNQVIDEGTLIFG
EVGLSGEVRGVSMAETRVREAEKLGFTSCIMPKTNVEGIQGKYKIKLIGVSNIKEAMEHI

Nucleotide

• Length: 1383 bp

>NTDB_id=300536 DQQ01_RS11490 WP_111920156.1 2362547..2363929(-) (radA) [Blautia argi strain KCTC 15426]
ATGGCAAAAGCGAAAAAAAGTGTATTTTTCTGCCAGAACTGTGGATATGAGTCTTCAAAATGGCTGGGACAGTGTCCGGG
CTGCAGGGAATGGAATTCCTTTGTGGAGGAAACGGTTTCTGCAGGAGGAAAGGCAGCCCCGGCAAAAGGAATCTCCGGTT
CGGAGGGACGTACAGGCAAAAAAAATGAGCCGGTCAGGCTTGCCGAAATTCAGGTCAGGGAAGCCGACAGAGTTTCAACC
AATATGGAAGAACTGGATCGAGTATTAGGCGGAGGAATCGTACCTGGCTCTATGGTGCTGGTCGGCGGAGATCCGGGAAT
CGGAAAATCCACCCTGCTTTTACAGGTATGCAGACAGCTCACCATCCAGGGACATAAGGTGTTGTATATATCAGGGGAGG
AATCTCTTCGCCAGATTAAGCTACGGGCAAAACGCATTGGAGAATTTAATGAGCATTTATATTTGCTTTGTGAAACCAAT
CTGGAAATAATTCGCAGTACCATTGAGCGGCTGAAGCCGGAAATGGTGGTGATTGATTCCATTCAGACTATGTACAATGA
AGAGGTGTCCTCTGCGCCGGGCAGTGTGTCCCAGGTGAGGGAATCCACCGGAATTCTCATGCAGATTGCAAAAGGATTAG
GAATTTCAGTGTTTATTGTAGGACATGTGACAAAGGACGGAAGTGTAGCAGGTCCCAGAGTTCTGGAGCATATGGTAGAT
ACGGTTCTGTACTTTGAGGGGGATAGGCAGCTTGCTTACCGTATTTTGCGAGGGGTTAAAAACCGTTTTGGCTCTACCAA
TGAAATTGGTGTTTTTGAGATGCGGGAAAAGGGGCTGGAGGAGGTGAAAAATCCTTCTCAGGCGTTGTTGAACGGACGTC
CTACTGATGCGTCCGGCACAACAGTAGTCTGTTCAGTGGAAGGTACCCGCCCTATTTTGATAGAAATTCAGGCGCTGGTA
ACCAGGACAAATTTCGGACTGCCAAGGAGAACCTCTGTGGGAATTGATTACAATCGTGTGAATCTTCTCATGGCAGTGCT
GGAGAAAAGAGCTGGGATTCGTCTGGGCGACTGTGATGCCTATGTAAATCTGGCGGGCGGTATGAAGCTGGGGGAGCCTG
CCATTGATTTGGGAATTGTGTTATCTCTTGTATCCAGTTACAAAAATCAGGTCATAGATGAAGGAACACTGATTTTCGGA
GAAGTAGGACTTTCTGGGGAAGTCCGGGGTGTCAGTATGGCGGAAACCAGAGTGCGGGAGGCAGAAAAGCTGGGCTTTAC
TTCCTGCATTATGCCGAAAACCAATGTAGAGGGGATACAGGGAAAATATAAAATAAAATTAATAGGAGTATCGAATATTA
AAGAAGCTATGGAACATATTTAA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (351-435)

• AAA domain (AAA_25) (71-227)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	57.112	99.348	0.567
radA	Streptococcus mitis SK321	55.435	100	0.554
radA	Streptococcus mitis NCTC 12261	55.435	100	0.554
radA	Streptococcus pneumoniae Rx1	55.435	100	0.554
radA	Streptococcus pneumoniae D39	55.435	100	0.554
radA	Streptococcus pneumoniae R6	55.435	100	0.554
radA	Streptococcus pneumoniae TIGR4	55.435	100	0.554