Detailed information NTG0300415

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ETK71_RS14475
• Genome accession: NZ_CP035411
• Coordinates: 2767181..2768443 (-)
• Length: 420 a.a.
• NCBI ID: WP_003229613.1
• Uniprot ID: A0ABU0V489
• Organism: Bacillus subtilis strain SRCM103622
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2762181..2773443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETK71_RS14460 (ETK71_14460)	yihA	2762280..2762867 (-)	588	WP_003229621.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ETK71_RS14465 (ETK71_14465)	lon	2762864..2765188 (-)	2325	WP_003229618.1	endopeptidase La	-
ETK71_RS14470 (ETK71_14470)	lonB	2765369..2767027 (-)	1659	WP_014477564.1	ATP-dependent protease LonB	-
ETK71_RS14475 (ETK71_14475)	clpX	2767181..2768443 (-)	1263	WP_003229613.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
ETK71_RS14480 (ETK71_14480)	tig	2768715..2769989 (-)	1275	WP_014480469.1	trigger factor	-
ETK71_RS14485 (ETK71_14485)	ddcA	2770217..2771221 (-)	1005	WP_029726367.1	DNA damage checkpoint antagonist DdcA	-
ETK71_RS14490 (ETK71_14490)	leuD	2771340..2771939 (-)	600	WP_041850185.1	3-isopropylmalate dehydratase small subunit	-
ETK71_RS14495 (ETK71_14495)	leuC	2771952..2773370 (-)	1419	WP_003229604.1	3-isopropylmalate dehydratase large subunit	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 46350.22 Da
• Isoelectric Point: 4.5879

>NTDB_id=300415 ETK71_RS14475 WP_003229613.1 2767181..2768443(-) (clpX) [Bacillus subtilis strain SRCM103622]
MFKFNEEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCTEIVEEELGTEEEVEFKDVPKPQEIREILNEYVIGQDQ
AKKSLAVAVYNHYKRINSNSKVDDVELSKSNISLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILL
KLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNI
LFICGGAFDGIEQIIKRRLGQKVIGFGADNKAADLEKEDLLSKVLPEDLLRFGLIPEFIGRLPVIASLEKLDEEALVAIL
TKPKNALVKQFKKMLELDNVELEFEEEALSEIAKKAIERKTGARGLRSIIEGIMLDVMFELPSRDDIEKCVITGATVTHG
EPPRLLLKDGTEVSQDKTSA

Nucleotide

• Length: 1263 bp

>NTDB_id=300415 ETK71_RS14475 WP_003229613.1 2767181..2768443(-) (clpX) [Bacillus subtilis strain SRCM103622]
ATGTTTAAATTTAACGAGGAAAAAGGACAATTAAAATGCTCGTTCTGTGGAAAAACACAAGATCAGGTTCGTAAGCTTGT
AGCTGGACCTGGTGTATATATATGTGACGAATGTATCGAACTCTGCACTGAAATTGTAGAGGAAGAACTCGGAACAGAAG
AAGAAGTAGAATTTAAAGACGTACCAAAGCCTCAGGAAATTCGCGAAATTTTGAATGAATATGTCATCGGCCAAGATCAA
GCGAAGAAATCACTTGCTGTTGCTGTGTATAACCACTATAAGCGCATTAACTCTAACAGCAAAGTTGATGATGTTGAGCT
TTCAAAAAGTAATATTTCATTAATCGGCCCTACGGGAAGCGGTAAAACCCTTCTGGCGCAAACATTGGCTCGCATTTTAA
ATGTGCCGTTTGCGATTGCAGACGCTACATCTTTGACTGAAGCTGGATACGTGGGTGAAGATGTAGAGAATATTCTCTTG
AAGCTCATCCAAGCTGCTGATTATGATGTGGAAAAAGCCGAAAAAGGCATTATCTATATTGATGAAATCGATAAAGTGGC
TAGAAAATCTGAAAACCCGTCTATCACACGTGATGTGTCAGGTGAGGGTGTACAGCAGGCATTGCTTAAAATTCTTGAGG
GTACAGTGGCAAGCGTGCCGCCTCAAGGTGGACGTAAGCATCCTCATCAAGAATTCATTCAAATTGACACAACAAATATT
TTGTTCATTTGCGGCGGAGCTTTCGATGGTATCGAACAAATCATCAAACGCCGTTTAGGCCAAAAAGTGATTGGATTCGG
TGCCGACAATAAAGCTGCTGATCTTGAGAAAGAAGATCTTCTTTCAAAAGTGCTTCCTGAAGATTTGCTCCGTTTCGGGT
TAATTCCTGAATTTATCGGACGTCTTCCGGTTATTGCAAGCCTTGAAAAGCTTGACGAAGAAGCATTGGTTGCGATCTTA
ACAAAACCGAAAAACGCTCTTGTTAAGCAATTCAAGAAAATGCTTGAGCTTGACAACGTTGAGCTTGAGTTTGAAGAAGA
AGCGCTTTCTGAAATTGCTAAAAAAGCAATTGAACGCAAGACTGGAGCACGCGGACTCCGTTCTATCATTGAAGGCATCA
TGCTTGATGTTATGTTTGAGCTGCCTTCTCGTGATGACATTGAAAAATGTGTAATTACCGGGGCAACTGTGACACACGGA
GAGCCTCCTCGCCTCTTATTAAAAGACGGCACTGAGGTAAGCCAAGATAAAACATCTGCATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (109-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	68.01	94.524	0.643
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.506	94.048	0.569