Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   DQ228_RS01005 Genome accession   NZ_CP030250
Coordinates   180501..181763 (+) Length   420 a.a.
NCBI ID   WP_011680685.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CS20     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 175501..186763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQ228_RS00980 - 176082..177431 (+) 1350 WP_011680683.1 glucose-6-phosphate isomerase -
  DQ228_RS00985 - 177619..178335 (+) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  DQ228_RS00990 - 178461..178799 (+) 339 WP_011225395.1 preprotein translocase subunit YajC -
  DQ228_RS00995 - 178928..179677 (+) 750 WP_002949314.1 isoprenyl transferase -
  DQ228_RS01000 - 179690..180484 (+) 795 WP_014607913.1 phosphatidate cytidylyltransferase -
  DQ228_RS01005 eeP 180501..181763 (+) 1263 WP_011680685.1 RIP metalloprotease RseP Regulator
  DQ228_RS01010 - 181834..183696 (+) 1863 WP_023909361.1 proline--tRNA ligase -
  DQ228_RS01015 - 184313..186253 (+) 1941 WP_014727309.1 ABC transporter substrate binding protein -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45621.05 Da        Isoelectric Point: 6.5104

>NTDB_id=300406 DQ228_RS01005 WP_011680685.1 180501..181763(+) (eeP) [Streptococcus thermophilus strain CS20]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=300406 DQ228_RS01005 WP_011680685.1 180501..181763(+) (eeP) [Streptococcus thermophilus strain CS20]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACATACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAGATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(204-272)

Peptidase family M50 (Peptidase_M50)

(6-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

100

100

1
  eeP Streptococcus thermophilus LMG 18311

99.762

100

0.998

Multiple sequence alignment