Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   DQW72_RS01520 Genome accession   NZ_CP030246
Coordinates   337008..337673 (+) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain CSF41498     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 332008..342673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQW72_RS01505 (DQW72_01480) - 333365..334909 (+) 1545 WP_049392296.1 NAD(P)H-binding protein -
  DQW72_RS01510 (DQW72_01485) - 335032..336501 (-) 1470 WP_002456720.1 alkaline phosphatase -
  DQW72_RS01515 (DQW72_01490) - 336798..336977 (+) 180 WP_002456719.1 hypothetical protein -
  DQW72_RS01520 (DQW72_01495) braR 337008..337673 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  DQW72_RS01525 (DQW72_01500) braS 337679..338575 (+) 897 WP_002468753.1 sensor histidine kinase Regulator
  DQW72_RS01530 (DQW72_01505) - 338686..339435 (+) 750 WP_049392297.1 ABC transporter ATP-binding protein -
  DQW72_RS01535 (DQW72_01510) - 339437..341449 (+) 2013 WP_049392300.1 ABC transporter permease -
  DQW72_RS01540 (DQW72_01515) - 341553..342143 (+) 591 WP_049392302.1 DUF4064 domain-containing protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=300366 DQW72_RS01520 WP_001830679.1 337008..337673(+) (braR) [Staphylococcus epidermidis strain CSF41498]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=300366 DQW72_RS01520 WP_001830679.1 337008..337673(+) (braR) [Staphylococcus epidermidis strain CSF41498]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGATAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2G7HYS8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792


Multiple sequence alignment