Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | SPH_RS08170 | Genome accession | NC_010380 |
| Coordinates | 1552936..1554168 (-) | Length | 410 a.a. |
| NCBI ID | WP_012972566.1 | Uniprot ID | A0A387B487 |
| Organism | Streptococcus pneumoniae Hungary19A-6 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1547936..1559168
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPH_RS08140 (SPH_1677) | - | 1548123..1549091 (+) | 969 | WP_000081002.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SPH_RS08145 (SPH_1678) | whiA | 1549125..1550036 (-) | 912 | WP_000011303.1 | DNA-binding protein WhiA | - |
| SPH_RS08150 (SPH_1679) | - | 1550033..1551010 (-) | 978 | WP_001231086.1 | YvcK family protein | - |
| SPH_RS08155 (SPH_1680) | rapZ | 1551007..1551897 (-) | 891 | WP_000163035.1 | RNase adapter RapZ | - |
| SPH_RS08160 (SPH_1681) | - | 1551949..1552329 (-) | 381 | WP_001140413.1 | RidA family protein | - |
| SPH_RS08165 (SPH_1682) | yihA | 1552340..1552927 (-) | 588 | WP_000422606.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| SPH_RS08170 (SPH_1683) | clpX | 1552936..1554168 (-) | 1233 | WP_012972566.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| SPH_RS08175 (SPH_1684) | - | 1554205..1554375 (-) | 171 | WP_000442260.1 | hypothetical protein | - |
| SPH_RS08180 (SPH_1685) | - | 1554375..1554881 (-) | 507 | WP_000162471.1 | dihydrofolate reductase | - |
| SPH_RS08185 (SPH_1686) | - | 1555011..1555529 (-) | 519 | WP_000229874.1 | Dps family protein | - |
| SPH_RS08190 (SPH_1687) | lytC | 1556026..1557531 (-) | 1506 | WP_075575672.1 | choline binding-anchored murein hydrolase LytC | - |
| SPH_RS08195 (SPH_1688) | tpiA | 1557569..1558327 (-) | 759 | WP_000087897.1 | triose-phosphate isomerase | - |
| SPH_RS08200 (SPH_1689) | - | 1558425..1559102 (-) | 678 | WP_000221611.1 | DnaD domain-containing protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45681.16 Da Isoelectric Point: 4.4240
>NTDB_id=30019 SPH_RS08170 WP_012972566.1 1552936..1554168(-) (clpX) [Streptococcus pneumoniae Hungary19A-6]
MPTNRNNDMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLHILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTDKPILETA
MPTNRNNDMMVYCSFCGKSQEEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLHILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTDKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=30019 SPH_RS08170 WP_012972566.1 1552936..1554168(-) (clpX) [Streptococcus pneumoniae Hungary19A-6]
ATGCCTACAAATAGGAATAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTACAAAAAATAAT
CGCAGGTAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTAGCCCAGGAAATCATTCGTGAGGAGTTGGCGGAAGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATCGAACTCCTCCATATCTTGAACCACTATGTAATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTGGCAGTTTACAACCACTACAAACGTATCAATTTCCACGATACGCGTGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGCCCAACTGGTTCAGGGAAAACTTTCCTTGCTCAGACCTTGGCTA
AGAGCTTGAATGTGCCTTTTGCGATTGCGGATGCGACAGCTCTGACGGAGGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTCAAACTCCTGCAGGCTGCTGACTTTAACATTGAACGTGCAGAGCGTGGGATTATCTACGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAGGGAACTGTTGCCAGCGTACCGCCTCAAGGTGGACGTAAACATCCACAACAAGAGATGATTCAAGTGGATACC
AAAAATATCCTCTTCATCGTGGGTGGTGCCTTTGATGGTATTGAAGAAATCGTCAAACAACGTCTGGGTGAAAAAGTCAT
CGGATTTGGTCAAAACAATAAAGCGATTGATGAAAACAGCTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TTGGTATTATCCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCTCTTGAACAATTGACCGTTGATGACTTGGTGCGT
ATTTTGAAAGAGCCAAGAAATGCCTTGGTTAAACAATATCAAACCTTGCTTTCTTATGATGATGTTGAGTTGGAATTTGA
CGACGAAGCCCTTCAAGAGATTGCCAACAAGGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCGATCATCGAAG
AAACCATGCTAGACGTCATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACGAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACGGCCTAG
ATGCCTACAAATAGGAATAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTACAAAAAATAAT
CGCAGGTAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTAGCCCAGGAAATCATTCGTGAGGAGTTGGCGGAAGAAG
TCTTGGCAGACTTGTCTGAAGTTCCAAAACCAATCGAACTCCTCCATATCTTGAACCACTATGTAATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTGGCAGTTTACAACCACTACAAACGTATCAATTTCCACGATACGCGTGAAGAGTCAGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGCCCAACTGGTTCAGGGAAAACTTTCCTTGCTCAGACCTTGGCTA
AGAGCTTGAATGTGCCTTTTGCGATTGCGGATGCGACAGCTCTGACGGAGGCTGGTTATGTGGGTGAGGACGTGGAAAAT
ATCCTCCTCAAACTCCTGCAGGCTGCTGACTTTAACATTGAACGTGCAGAGCGTGGGATTATCTACGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGATGTTTCTGGTGAAGGGGTGCAACAAGCCCTTCTCAAGA
TTATCGAGGGAACTGTTGCCAGCGTACCGCCTCAAGGTGGACGTAAACATCCACAACAAGAGATGATTCAAGTGGATACC
AAAAATATCCTCTTCATCGTGGGTGGTGCCTTTGATGGTATTGAAGAAATCGTCAAACAACGTCTGGGTGAAAAAGTCAT
CGGATTTGGTCAAAACAATAAAGCGATTGATGAAAACAGCTCTTACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TTGGTATTATCCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCTCTTGAACAATTGACCGTTGATGACTTGGTGCGT
ATTTTGAAAGAGCCAAGAAATGCCTTGGTTAAACAATATCAAACCTTGCTTTCTTATGATGATGTTGAGTTGGAATTTGA
CGACGAAGCCCTTCAAGAGATTGCCAACAAGGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCGATCATCGAAG
AAACCATGCTAGACGTCATGTTTGAAGTACCGAGTCAGGAAAATGTGAAATTGGTCCGCATCACGAAAGAAGCTGTCGAT
GGAACGGATAAACCAATCCTAGAAACGGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
87.073 |
100 |
0.871 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.463 |
98.049 |
0.563 |