Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BVDSYZ_RS16575 Genome accession   NZ_CP030150
Coordinates   3295439..3297742 (-) Length   767 a.a.
NCBI ID   WP_040238945.1    Uniprot ID   -
Organism   Bacillus velezensis strain DSYZ     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3290439..3302742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVDSYZ_RS16535 (BVDSYZ_16535) - 3290899..3291330 (+) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -
  BVDSYZ_RS16540 (BVDSYZ_16540) - 3291330..3291671 (+) 342 WP_015418102.1 Na(+)/H(+) antiporter subunit C -
  BVDSYZ_RS16545 (BVDSYZ_16545) - 3291664..3293145 (+) 1482 WP_015418103.1 Na+/H+ antiporter subunit D -
  BVDSYZ_RS16550 (BVDSYZ_16550) - 3293151..3293627 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  BVDSYZ_RS16555 (BVDSYZ_16555) - 3293627..3293911 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  BVDSYZ_RS16560 (BVDSYZ_16560) mnhG 3293895..3294269 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  BVDSYZ_RS16565 (BVDSYZ_16565) - 3294309..3294692 (-) 384 WP_040238946.1 hotdog fold thioesterase -
  BVDSYZ_RS16570 (BVDSYZ_16570) comA 3294714..3295358 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  BVDSYZ_RS16575 (BVDSYZ_16575) comP 3295439..3297742 (-) 2304 WP_040238945.1 histidine kinase Regulator
  BVDSYZ_RS16580 (BVDSYZ_16580) comX 3297762..3297941 (-) 180 WP_306383677.1 competence pheromone ComX -
  BVDSYZ_RS16585 (BVDSYZ_16585) comQ 3297895..3298881 (-) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  BVDSYZ_RS16590 (BVDSYZ_16590) degQ 3299012..3299152 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  BVDSYZ_RS16600 (BVDSYZ_16600) - 3299615..3299956 (+) 342 WP_015418107.1 hypothetical protein -
  BVDSYZ_RS16605 (BVDSYZ_16605) - 3299963..3301186 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 89047.53 Da        Isoelectric Point: 8.5625

>NTDB_id=299735 BVDSYZ_RS16575 WP_040238945.1 3295439..3297742(-) (comP) [Bacillus velezensis strain DSYZ]
MKKLIKPFTISIIILSVIYVCYVAFININGIIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIMIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKRDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=299735 BVDSYZ_RS16575 WP_040238945.1 3295439..3297742(-) (comP) [Bacillus velezensis strain DSYZ]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGAATTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGCATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGTTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTGCCCTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTGCTTATCCCATTGGGGTTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTATGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAGGGATAATGAACCTGATTGGGAAATGTATTCAAAAGAATTTAAGAAGGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTCTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCTCCATTAATAC
ACCGAGACTGACACGGGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAACGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCTCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGA
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(567-636)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

72.987

100

0.733


Multiple sequence alignment