Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ES969_RS16420 Genome accession   NZ_CP035402
Coordinates   3022528..3023391 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain SRCM103576     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3017528..3028391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS16385 (ES969_16385) mrpE 3017696..3018172 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ES969_RS16390 (ES969_16390) mrpF 3018172..3018456 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ES969_RS16395 (ES969_16395) mnhG 3018440..3018814 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ES969_RS16400 (ES969_16400) yuxO 3018853..3019233 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  ES969_RS16405 (ES969_16405) comA 3019252..3019896 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ES969_RS16410 (ES969_16410) comP 3019977..3022289 (-) 2313 WP_103330147.1 sensor histidine kinase Regulator
  ES969_RS16415 (ES969_16415) comX 3022305..3022526 (-) 222 WP_014480704.1 competence pheromone ComX -
  ES969_RS16420 (ES969_16420) comQ 3022528..3023391 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ES969_RS16425 (ES969_16425) degQ 3023576..3023716 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ES969_RS16430 (ES969_16430) - 3023938..3024063 (+) 126 WP_003228793.1 hypothetical protein -
  ES969_RS16435 (ES969_16435) - 3024178..3024546 (+) 369 WP_046381300.1 hypothetical protein -
  ES969_RS16440 (ES969_16440) pdeH 3024522..3025751 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  ES969_RS16445 (ES969_16445) pncB 3025887..3027359 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ES969_RS16450 (ES969_16450) pncA 3027375..3027926 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=299689 ES969_RS16420 WP_014480705.1 3022528..3023391(-) (comQ) [Bacillus subtilis strain SRCM103576]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=299689 ES969_RS16420 WP_014480705.1 3022528..3023391(-) (comQ) [Bacillus subtilis strain SRCM103576]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439