Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | C2G36_RS01660 | Genome accession | NZ_CP030138 |
| Coordinates | 351350..351820 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain M48 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 340765..383237 | 351350..351820 | within | 0 |
Gene organization within MGE regions
Location: 340765..383237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2G36_RS01575 (C2G36_01580) | - | 340765..341970 (-) | 1206 | WP_000264186.1 | tyrosine-type recombinase/integrase | - |
| C2G36_RS01580 (C2G36_01585) | - | 342081..342260 (+) | 180 | WP_000337826.1 | hypothetical protein | - |
| C2G36_RS01585 (C2G36_01590) | - | 342240..343172 (-) | 933 | WP_000392181.1 | hypothetical protein | - |
| C2G36_RS01590 (C2G36_01595) | - | 343204..343929 (-) | 726 | WP_000661437.1 | PH domain-containing protein | - |
| C2G36_RS01595 (C2G36_01600) | - | 343957..344631 (-) | 675 | WP_000775187.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C2G36_RS01600 (C2G36_01605) | - | 344648..344980 (-) | 333 | WP_001055143.1 | helix-turn-helix transcriptional regulator | - |
| C2G36_RS01605 (C2G36_01610) | - | 345243..345437 (+) | 195 | WP_000108122.1 | helix-turn-helix transcriptional regulator | - |
| C2G36_RS01610 (C2G36_01615) | - | 345437..346204 (+) | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| C2G36_RS01615 (C2G36_01620) | - | 346205..346429 (+) | 225 | WP_000187184.1 | hypothetical protein | - |
| C2G36_RS16415 | - | 346469..346567 (+) | 99 | Protein_306 | hypothetical protein | - |
| C2G36_RS01625 (C2G36_01630) | - | 346717..346980 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| C2G36_RS01630 (C2G36_01635) | - | 346992..347153 (+) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| C2G36_RS01635 (C2G36_01640) | - | 347245..347505 (+) | 261 | WP_000291089.1 | DUF1108 family protein | - |
| C2G36_RS01640 (C2G36_01645) | - | 347514..347777 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| C2G36_RS01645 (C2G36_01650) | - | 347786..349729 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| C2G36_RS01650 (C2G36_01655) | - | 349731..350651 (+) | 921 | WP_000180598.1 | recombinase RecT | - |
| C2G36_RS01655 (C2G36_01660) | - | 350732..351349 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| C2G36_RS01660 (C2G36_01665) | ssbA | 351350..351820 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| C2G36_RS01665 (C2G36_01670) | - | 351850..352743 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| C2G36_RS01670 (C2G36_01675) | - | 352750..352968 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| C2G36_RS01675 (C2G36_01680) | - | 352977..353381 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C2G36_RS01680 (C2G36_01685) | - | 353394..353766 (+) | 373 | Protein_318 | SA1788 family PVL leukocidin-associated protein | - |
| C2G36_RS01685 (C2G36_01690) | - | 353766..354023 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| C2G36_RS01690 (C2G36_01695) | - | 354020..354268 (+) | 249 | WP_000178986.1 | SAV1978 family virulence-associated passenger protein | - |
| C2G36_RS01695 (C2G36_01700) | - | 354281..354682 (+) | 402 | WP_000695762.1 | hypothetical protein | - |
| C2G36_RS01700 (C2G36_01705) | - | 354679..355026 (+) | 348 | WP_000979209.1 | YopX family protein | - |
| C2G36_RS01705 (C2G36_01710) | - | 355023..355331 (+) | 309 | WP_000144710.1 | hypothetical protein | - |
| C2G36_RS01710 (C2G36_01715) | - | 355324..355572 (+) | 249 | WP_001065026.1 | DUF1024 family protein | - |
| C2G36_RS01715 (C2G36_01720) | - | 355565..356101 (+) | 537 | WP_000185663.1 | dUTPase | - |
| C2G36_RS01720 (C2G36_01725) | - | 356138..356338 (+) | 201 | WP_000195821.1 | DUF1381 domain-containing protein | - |
| C2G36_RS01725 (C2G36_01730) | - | 356437..356673 (+) | 237 | WP_000608279.1 | hypothetical protein | - |
| C2G36_RS01730 (C2G36_01735) | - | 356666..356839 (+) | 174 | WP_000591891.1 | transcriptional activator RinB | - |
| C2G36_RS01735 (C2G36_01740) | - | 356840..357205 (+) | 366 | WP_000989954.1 | hypothetical protein | - |
| C2G36_RS01740 (C2G36_01745) | - | 357206..357352 (+) | 147 | WP_000989960.1 | hypothetical protein | - |
| C2G36_RS01745 (C2G36_01750) | - | 357376..357816 (+) | 441 | WP_000162703.1 | RinA family phage transcriptional activator | - |
| C2G36_RS01750 (C2G36_01755) | - | 358127..358621 (+) | 495 | WP_052999282.1 | terminase small subunit | - |
| C2G36_RS01755 (C2G36_01760) | - | 358614..359822 (+) | 1209 | WP_001606760.1 | PBSX family phage terminase large subunit | - |
| C2G36_RS01760 (C2G36_01765) | - | 359836..361254 (+) | 1419 | WP_000283553.1 | phage portal protein | - |
| C2G36_RS01765 (C2G36_01770) | - | 361193..362176 (+) | 984 | WP_014532414.1 | phage head morphogenesis protein | - |
| C2G36_RS01770 (C2G36_01775) | - | 362178..362384 (+) | 207 | WP_000346033.1 | hypothetical protein | - |
| C2G36_RS01775 (C2G36_01780) | - | 362489..363085 (+) | 597 | WP_000366932.1 | phage scaffolding protein | - |
| C2G36_RS01780 (C2G36_01785) | - | 363106..363930 (+) | 825 | WP_001135558.1 | N4-gp56 family major capsid protein | - |
| C2G36_RS01785 (C2G36_01790) | - | 363947..364273 (+) | 327 | WP_000278799.1 | Rho termination factor N-terminal domain-containing protein | - |
| C2G36_RS01790 (C2G36_01795) | - | 364273..364587 (+) | 315 | WP_000338935.1 | phage head-tail connector protein | - |
| C2G36_RS01795 (C2G36_01800) | - | 364580..364915 (+) | 336 | WP_017431444.1 | phage head closure protein | - |
| C2G36_RS01800 (C2G36_01805) | - | 364902..365315 (+) | 414 | WP_001151335.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| C2G36_RS01805 (C2G36_01810) | - | 365328..365765 (+) | 438 | WP_000270196.1 | DUF3168 domain-containing protein | - |
| C2G36_RS01810 (C2G36_01815) | - | 365752..366312 (+) | 561 | WP_000046067.1 | hypothetical protein | - |
| C2G36_RS01815 (C2G36_01820) | - | 366374..366868 (+) | 495 | WP_000141082.1 | tail assembly chaperone | - |
| C2G36_RS01820 (C2G36_01825) | - | 366889..367230 (+) | 342 | WP_001580347.1 | hypothetical protein | - |
| C2G36_RS01825 (C2G36_01830) | - | 367233..370202 (+) | 2970 | WP_000414234.1 | terminase | - |
| C2G36_RS01830 (C2G36_01835) | - | 370217..371152 (+) | 936 | WP_000560193.1 | phage tail domain-containing protein | - |
| C2G36_RS01835 (C2G36_01840) | - | 371163..373045 (+) | 1883 | Protein_349 | SGNH/GDSL hydrolase family protein | - |
| C2G36_RS01840 (C2G36_01845) | - | 373058..374936 (+) | 1879 | Protein_350 | hypothetical protein | - |
| C2G36_RS01845 (C2G36_01850) | - | 374936..376751 (+) | 1816 | Protein_351 | phage baseplate upper protein | - |
| C2G36_RS01850 (C2G36_01855) | - | 376751..377128 (+) | 378 | WP_000869363.1 | DUF2977 domain-containing protein | - |
| C2G36_RS01855 (C2G36_01860) | - | 377138..377310 (+) | 173 | Protein_353 | XkdX family protein | - |
| C2G36_RS01860 (C2G36_01865) | - | 377351..377649 (+) | 299 | Protein_354 | DUF2951 family protein | - |
| C2G36_RS01865 (C2G36_01870) | - | 377786..379659 (+) | 1874 | Protein_355 | glucosaminidase domain-containing protein | - |
| C2G36_RS01870 (C2G36_01875) | - | 379672..380919 (+) | 1248 | WP_129367396.1 | BppU family phage baseplate upper protein | - |
| C2G36_RS01875 (C2G36_01880) | - | 380924..381319 (+) | 396 | WP_000387945.1 | hypothetical protein | - |
| C2G36_RS01880 (C2G36_01885) | - | 381374..381811 (+) | 438 | WP_000354132.1 | phage holin | - |
| C2G36_RS01885 (C2G36_01890) | - | 381792..383237 (+) | 1446 | WP_001148131.1 | SH3 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=299608 C2G36_RS01660 WP_000934759.1 351350..351820(+) (ssbA) [Staphylococcus aureus strain M48]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=299608 C2G36_RS01660 WP_000934759.1 351350..351820(+) (ssbA) [Staphylococcus aureus strain M48]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |