Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CHN55_RS06670 | Genome accession | NZ_CP030136 |
| Coordinates | 1217246..1217545 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain S57 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1212246..1222545
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHN55_RS06630 (CHN55_06630) | - | 1212307..1212510 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| CHN55_RS06635 (CHN55_06635) | - | 1212507..1213493 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CHN55_RS06640 (CHN55_06640) | - | 1213493..1213822 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CHN55_RS06645 (CHN55_06645) | - | 1213819..1214442 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CHN55_RS06650 (CHN55_06650) | comGA | 1214494..1215468 (+) | 975 | WP_031587486.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CHN55_RS06655 (CHN55_06655) | comGB | 1215440..1216510 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CHN55_RS06660 (CHN55_06660) | comGC | 1216524..1216835 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CHN55_RS06665 (CHN55_06665) | comGD | 1216813..1217259 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CHN55_RS06670 (CHN55_06670) | comGE | 1217246..1217545 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CHN55_RS06675 (CHN55_06675) | comGF | 1217463..1217960 (+) | 498 | WP_029694050.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CHN55_RS06680 (CHN55_06680) | - | 1218057..1218203 (+) | 147 | WP_001792109.1 | hypothetical protein | - |
| CHN55_RS06685 (CHN55_06685) | - | 1218193..1218717 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| CHN55_RS06690 (CHN55_06690) | gcvT | 1218876..1219967 (+) | 1092 | WP_000093348.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CHN55_RS06695 (CHN55_06695) | gcvPA | 1219987..1221333 (+) | 1347 | WP_000019690.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=299541 CHN55_RS06670 WP_000844413.1 1217246..1217545(+) (comGE) [Staphylococcus aureus strain S57]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=299541 CHN55_RS06670 WP_000844413.1 1217246..1217545(+) (comGE) [Staphylococcus aureus strain S57]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |