Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CHN55_RS03375 | Genome accession | NZ_CP030136 |
| Coordinates | 636996..637391 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain S57 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 631996..642391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHN55_RS03345 (CHN55_03345) | - | 633254..633658 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CHN55_RS03350 (CHN55_03350) | - | 633996..634088 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| CHN55_RS03355 (CHN55_03355) | - | 634220..634453 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CHN55_RS03360 (CHN55_03360) | murA | 634564..635829 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CHN55_RS03365 (CHN55_03365) | fabZ | 635863..636303 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CHN55_RS03370 (CHN55_03370) | - | 636362..636802 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CHN55_RS03375 (CHN55_03375) | ssb | 636996..637391 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CHN55_RS03380 (CHN55_03380) | sceD | 637779..638474 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| CHN55_RS03390 (CHN55_03390) | tenA | 638998..639687 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| CHN55_RS03395 (CHN55_03395) | thiD | 639680..640510 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CHN55_RS03400 (CHN55_03400) | thiM | 640494..641294 (+) | 801 | WP_031590212.1 | hydroxyethylthiazole kinase | - |
| CHN55_RS03405 (CHN55_03405) | thiE | 641287..641928 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=299522 CHN55_RS03375 WP_000932694.1 636996..637391(+) (ssb) [Staphylococcus aureus strain S57]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=299522 CHN55_RS03375 WP_000932694.1 636996..637391(+) (ssb) [Staphylococcus aureus strain S57]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |